KEGG   Alnus glutinosa (common alder): 133864359
Entry
133864359         CDS       T10577                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
aglu  Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:aglu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aglu03036]
    133864359
   03400 DNA repair and recombination proteins [BR:aglu03400]
    133864359
Chromosome and associated proteins [BR:aglu03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    133864359
DNA repair and recombination proteins [BR:aglu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     133864359
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ RICTOR_N TOR1L1_N
Other DBs
NCBI-GeneID: 133864359
NCBI-ProteinID: XP_062156643
LinkDB
Position
3:complement(10484444..10512394)
AA seq 1162 aa
MTEPSQLSQLIESFVDSSRSPSQQAASLDTIASLVKNDVLTMQELVKEMEMYLTVTDNVL
RARGILLLGEVVACLPSKPLDNTTIHSLMAFFTNRLADWKALRGALVGCLALMRRKSTAG
MVTGTDAKAAAQSYLQNLQVQSLGQHDRKLCFELLECLLERYPSAVAPLGDELVYGICEA
IDSEKDPQCLMLTFHIVEILVRLFPDPSGPLASFAGDLFEILGCYFPIHFTHPKGEDLDI
KRDDLARALMLAFSSTPLFEPFAIPLLLEKLSSSLPFAKVDSLKYLNDCTLKYGAEGMAK
HAEAIWLLSIKDAIYTSLQGPALSFTSEYLDSLGFQENEIAREALALLQQVIMQNNGLFL
GLIIKDEDINMILNTVTDYERYNDIPSQGKLKLYAVGCILSISTKSSITSCNRVFESFFP
RLMEILGLSVRNSSGVHSPNDNHLLSKRLNFGVLYLCVELLSACRDLIAGSKEISSQSVS
ACETCYCMLQSFSTSLTKAFCSTLATSPHDAHIHFGVKGLQILATFPGDVSPIPISEFEN
ILNTFMSIITVNFSETLIWKLALKALVNIGSFIDRYHESKKFSSYMGIVVEKIVSLVSLD
DLTMPFPLKLEAISGIGTSGLNYMLNIVQGLEEAIYANIFEVYVHGNLKSAEITVRLLEC
YSNKVLPWIHDNGDFEGVLLRFPVNIWNQIESCVDFSVQVQEKELLDAMMTAMRHAVAFC
TEESQNKIIQKAYSILALSTSFSLKEFTSLTIPSQLDWLQLTQRIDNLSHRDEWILLLFA
SVVIAVRPQTHIPDVKGILYLFMTTLLKGYIPAAQALGSMVNKMGKKSSGSEISSDCTLE
EALDIIFQMKLWNPHNNAALMSCSGMTNGSEMGDTDLCLSVANNRLPQIHAIAGLSWIGK
GLLLRGHEKVKDVTMIFLEFLLSNNRMDALSLKHHSLEKSFEQDLHPSTMKSAADAFHIL
MSDSEVCLNRKFHAIIRPLYKQRFFSTMMPILQPLIMKNDSSFSRSMLYRAFAHIISDTP
LIAILSEAKLLPILLDCLSMLNKDIQDKHSLYSLLLVLSGILTDKNGQEAVIENAHLVVN
CLTGLISYPHKMLVRETAIQCLVAMSELPHARIYPMRIQVLRAISKALDDPKSAVRQEAV
RCRQGITCFGKSSFLNDAAEFF
NT seq 3489 nt   +upstreamnt  +downstreamnt
atgacagaaccgagccagttgagtcagctcattgagtcgttcgtcgactcgtctcgctcc
ccgagtcagcaggctgctagcttggacacaattgcttctcttgtgaagaatgatgtatta
actatgcaagaactggtcaaagagatggaaatgtatttgactgttacagataacgtcctt
cgtgcgagaggtattcttctccttggggaagtggttgcatgtcttccatcaaagccacta
gacaatactactatacatagcttgatggcgttcttcaccaacagattggcagattggaaa
gctttacgtggtgcacttgttggttgcttggcactaatgaggagaaaaagtactgctggt
atggtgactggcactgatgcaaaagcagctgcccagtcttatttacagaacctacaggtg
cagtctttaggacagcatgataggaagctgtgctttgaacttctggagtgcctgttggaa
cgctaccccagtgcagttgctccactgggcgatgagcttgtttatggaatctgtgaagct
attgattcagaaaaggatcctcaatgcttaatgcttacatttcatatcgttgaaattttg
gtgcggctatttccagatccatctggtccacttgcaagttttgctggagatctttttgaa
attctgggctgttactttcctattcattttacacatccaaaaggtgaagatcttgatatc
aaaagggacgacctcgcgagggcactaatgttggctttctcctccactcctctttttgag
ccatttgcaattccattgcttcttgaaaaactttcttcttctctgccattcgcaaaggtc
gattccctgaagtatctcaacgattgcacattgaagtatggagcagaaggaatggcaaaa
catgctgaagctatatggttgttatcaattaaagatgcaatttatacttcacttcaaggg
cctgctttatcctttacttcagaatatctagacagtcttggctttcaggagaatgaaatt
gcaagagaagctttagcacttctgcagcaggttattatgcaaaataatggtttgttttta
ggtttgataattaaagatgaagacataaatatgattttgaacaccgtcactgattacgag
agatataatgatattccctcgcaaggcaagctgaaactatatgcagttggttgtatcctt
tctatttctacgaagagttccattacttcctgcaatagagtgtttgaaagtttcttcccc
cgcttgatggaaattctagggctctctgtaagaaattcatctggggttcactcaccaaat
gacaatcatttactctccaaaagactaaattttggggttctttatctctgtgttgaactt
ctttcagcatgcagagatttgattgcaggctccaaggaaatttcatctcaatctgtttct
gcatgtgagacatgctactgcatgcttcagagcttttcaacttcattaactaaggccttt
tgttctaccttggcgacaagtcctcatgatgcacatattcattttggagtgaagggtttg
cagattctggctactttcccaggagatgtttctccaataccgatatcagagtttgagaat
attttgaacacattcatgtcaattatcacagtgaatttcagtgagacattaatatggaaa
ttggcattgaaggcgttggtgaacattggctcatttattgatagatatcatgagtctaag
aagttttcaagctatatgggtatagtagttgaaaagattgtttccctggtgtctcttgat
gatcttaccatgccttttccactcaaactggaagcgatatctggcattggcacaagtggg
ctgaattatatgctgaacattgtccaaggattggaagaagctatatatgccaatatattt
gaggtttatgtccatggaaatttgaagtcagctgaaatcacagttaggcttttggaatgc
tactctaataaggtgcttccatggatccatgacaatggagattttgagggagtgttgctg
cgatttcctgttaatatttggaaccaaattgaaagttgtgttgattttagtgttcaagtt
caagaaaaggagcttcttgatgcaatgatgactgcaatgaggcatgccgttgcgttttgt
acagaggaaagccagaacaaaataatccaaaaagcttacagcatacttgctttaagcact
tctttttctctaaaggaattcacgtctctcaccattccatcccaactggattggctacag
ctcactcagaggattgacaatttgtcccatagagatgaatggattcttttgctatttgca
tctgtagttatagcagttcgtccccaaacacacattccagatgtaaaaggaatcttgtat
ttgtttatgacaactcttctcaagggttatattccggcagctcaggcattgggttccatg
gttaacaaaatgggtaaaaaatccagtggatcagagatttcaagtgactgtaccttggaa
gaagcactagatatcatttttcaaatgaaattatggaaccctcataataatgctgcttta
atgagctgtagtggaatgactaatggaagtgaaatgggtgatactgatttatgccttagt
gttgcgaacaataggttgccccagatacatgccattgctggactatcatggattggaaaa
ggtttgcttctgcgtggtcatgaaaaagttaaagatgtaacaatgatttttctggagttt
ttactgtcaaataacagaatggatgccttgtcattaaagcatcattcactggagaaaagt
tttgagcaggatttgcatccctccacgatgaaaagtgcggcagatgcatttcatattctt
atgagtgattctgaagtttgtttgaatcgaaagtttcatgcaataatacggccactctat
aagcaacgttttttctctaccatgatgcctatattgcaacctttgataatgaaaaatgat
tcgtcattttccagatctatgctgtatcgggcatttgcacatattatatctgatactcca
ttaattgctattttgagcgaagccaagctcttacctattcttctggattgcttatccatg
ttgaacaaggatattcaggacaaacattcattgtacagtctcctgctagtcttatctggg
atattgacagataaaaatgggcaagaagctgtcattgagaatgctcatcttgtcgttaat
tgcctcacaggacttatttcctaccctcataagatgcttgtccgagagacagcaattcag
tgtctggtcgccatgtctgagctgccccatgcaaggatctatcccatgagaatacaggta
ctacgagctatatcaaaggctcttgatgaccccaagagtgctgttcgtcaggaagccgtc
agatgccgacagggcatcacttgcttcgggaagtcttcttttctgaatgacgcagcagag
tttttctga

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