Alnus glutinosa (common alder): 133864513
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Entry
133864513 CDS
T10577
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
133864513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aglu03400
]
133864513
DNA repair and recombination proteins [BR:
aglu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
133864513
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
133864513
NCBI-ProteinID:
XP_062156851
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All DBs
Position
3:complement(7805674..7809520)
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AA seq
651 aa
AA seq
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MAMEEREEGGKVRTLIEKATNSTAPEVDPRLLKAIKSVVRYSDPELRLAAQTLMDLMKRD
HSQVRYLTLLIIDELFMRSKLFRTILVENIDQLLSLSVGFRRNLPLPAPSAVASVLRSKA
IEFLEKWNSSFGIHYRQLRLGFDYLKNTLKFQFPNLQAQAARIQQERRERERRSKEILLK
KFEMLKENFSSIKEEIKTTIDEIGECLDIVCTKEEFMPLGLVDDEDFEEFRSSELLQIRL
DALKEGKKVHENSDNKVVFDALRELYKLLVARHLVSVQEGISVLVRVEVADIRFRDSTLK
ELIDIRNHLQSVKKRCEESGCALPNTTSRDDEEEDFWEEGKIGSLENERSTVPNKKNENL
SIALASIELKNRTLESRNRGCNDNELPSLEGGETGTNSLRNKLLAEAPEMSWGSFLNNWG
SNREVLANQRGLELESHWGRVDYDAVIPAEKIAELNVHSTLYKEEQTEIQPCRAPLRKGG
LCQRRDLRVCPFHGPIIPRDDEGKPLNQNSSKDEITIDSGTDLVEQLAKQAVKNVRERDT
EVVKKREIDKRSLKRAKLAKVREHNDVVLRDAALASTSRSAAIGEEMEATNGEKLSARNK
KETLSSMLCKKVTPKDRLAQRLLNTRVKDATVRELTLGEDANYREAFPNQW
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggaggagagagaggagggagggaaggtaaggactttgatagagaaggcgacg
aactccacggctccggaggtggaccctcgcctcctcaaggctatcaaatcggttgtccgc
tattcggatccggagctccgactcgccgcccagacccttatggaccttatgaagcgcgat
cactctcaggtaaggtatctcacacttctcataattgatgaactcttcatgcggtcgaag
cttttcagaaccatccttgttgagaacatcgatcagttactgagtttgagtgtcgggttc
agaagaaatctgcctctccctgctccatcagctgttgcatctgttttgcgctcgaaggca
attgaattcctggagaagtggaactcttcctttgggattcattacaggcagctcagatta
ggatttgactaccttaaaaacaccctcaagttccaatttcctaatctacaggcacaagca
gctcgaattcagcaggagagaagggaaagggaaagaaggtcaaaagagattttacttaaa
aaatttgaaatgttgaaggagaatttctcatcaataaaggaagaaataaagacaacaata
gatgagattggagaatgtttagacattgtctgtacaaaagaggaatttatgccactgggt
cttgtagatgatgaagattttgaagagtttcggtcatctgaactgctgcaaatccgtctc
gatgctttaaaggaagggaaaaaggtacatgaaaacagtgacaataaagtggtttttgat
gcattgagggagctatacaagcttctagtggcaaggcatttggtttcagtccaagaaggc
atttctgttcttgtaagggtcgaagtggcagacatcaggttcagagattccactttgaag
gagttaatagatatccgaaatcatctccaatcggtgaagaagaggtgtgaagaatcaggt
tgtgctcttccaaacactacaagtcgtgatgatgaagaagaagatttctgggaggagggt
aaaattggatcacttgagaatgagaggtctactgtgcccaacaagaaaaatgaaaatctt
tccatagcattagcatctatcgagttgaaaaatagaactcttgaaagcagaaacaggggt
tgtaatgacaatgagctgcccagtcttgaaggtggtgaaactggtacaaactctttaagg
aataagcttctggctgaagctcccgagatgagctggggctctttcttgaataactggggt
tcaaatagggaggttttagctaaccagcggggattggagcttgaaagtcactggggcagg
gtggactatgatgcagttattccagctgagaaaattgcagaactgaatgttcattcaaca
ctttacaaagaggagcaaactgaaattcaaccatgccgcgctcctttgaggaaaggggga
ctttgtcagaggagagatttgagagtttgcccatttcatggacctattatacctagagat
gacgaaggaaagccacttaatcagaactcttcgaaggacgagataactattgattcaggg
accgatttagttgagcagttagcaaaacaagctgtgaagaatgttcgtgagagagataca
gaggtagtaaaaaagagagaaattgataaacggtcactgaagcgtgcaaagcttgcgaaa
gttcgggagcacaatgacgtggttcttagggatgctgcattggcatcaacttcaagatct
gcagctattggagaagaaatggaggcaacgaatggagagaagctgtcagccagaaacaag
aaggaaacactctcatccatgctgtgcaagaaagtaacaccaaaagataggttagctcag
aggcttttgaatacacgggtgaaggatgcaacagtaagagagcttacattgggtgaggat
gctaattaccgagaagcctttccaaatcaatggtaa
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