Alnus glutinosa (common alder): 133864977
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Entry
133864977 CDS
T10577
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 1
KO
K03255
protein TIF31
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
aglu03012
]
133864977
Translation factors [BR:
aglu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
133864977
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_MalT
TPR_9
CLU
TPR_1
TPR_8
UL40
Motif
Other DBs
NCBI-GeneID:
133864977
NCBI-ProteinID:
XP_062157418
LinkDB
All DBs
Position
3:complement(7719560..7737063)
Genome browser
AA seq
1876 aa
AA seq
DB search
MAPRNSRGKAKGEKKKKEEKVLPVVMDITVNLPDETRVVLRGISTDRIIDVRRLLSVKTE
TCSVTNFSLSHEVRGPRLKDTVDVSALKPCVLTLVEEDYDEERTVVHVRRLLDIVACTTS
FGPSATSKESLKSDSTKNAPGAQDKGAPASTKKSTTTQTQGPAAKQEAAMEEEGEMSHAF
PKLGTFYEFFSLSHLTPPLQFIRREMRRHVDEISADDHIFSLDVKLCNGKVVHVEACRNG
FYSVGKQRILCHNLVDLLRQLSRAFDNAYNDLMKAFSERNKFGNLPYGFRANTWLVPPVA
AQLPSVFPPLPVEDQTWGGNGGGLGIDGKSDLIPWANEFLLLASMPCKTAEERQVRDRKA
FLLHSLFVDVAIFRAIKAVQHVTGHTNLTCSVSNGEILYTESVGDLNIMVMKDASNASCK
VDTKIDGIQATGSDQKNLVERNLLKGITADENTAAQDIATLGVINVRYCGYIAIVQVAQR
ENDKASTTSQSIELLDQPEGGANALNINSLRLLLHKTTPSEHNKPVPHLQTLEHEELSAS
QTSVERLLEQSVAKLEEEELGSDHVVRWELGACWIQHLRDQKNTEKDKKPSGEKAKNEMK
VEGLGTNLRSLKNNKKKSDGSNVKVQSESSRSHAEGIIGEAKISILSSVESQLETNAKEN
EIAMKRILPEAAFARLKESETGLHCKSLPELIDLSQKYYTEVALPKLVADFGSLELSPVD
GRTLTDFMHTRGLRMRCLGQVVKLSEKLPHVQALCIHEMIVRAFKHILQAVIAVVDNTEN
MAVSIAAALNMMLGVPENEESNKSCNAHSLVWRWLEVFLMKRYEWDLSSLNYKDVRKFAI
LRGLCHKVGIELVPRDFDMDSPNPFRKSDVVSLVPVYKQAACSSADGRQLLESSKTALDK
GKLEDAVAYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATVYQQKALDINE
RELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVA
MMEEGLGNVHVALRYLHKALKCNERLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQT
TLQILRAKLGPDDLRTQDAAAWLEYFESKALEQQEAARNGTRKPDASIASKGHLSVSDLL
DYINPNDDVEGRDGAVKRKSYITKVKGKSYQNTSLGGSDESPKETPKVVSEEERPLPETE
GSADANQVTGSVPVESQKSVMQTTVEENPKIANEIFSETHAEGEDGWQPVQRPRLAGSSG
RRLKQRPATIGRVYGYQKKNADNEMEYTPVKNTLKNTKHYLLKKRTISHGSYTDHQTVNP
AEATKFGRRIVKAVTYRVKSMPSSTKTVTTETSGNSGELSIAPLPCATSLPNDVAPLKSS
IVSLGKSPSYKEVALAPPGSIGKLQVWVPQSDFPETQGLGFGKHEEETNEVKGNDELIRT
GAENIFEEDKISIPNSEDHLKEEIGITEKKEDTKINDAMEDKPSLMASESVEGLESGSVE
VQEVVEASILVDGVANPVDSPKSEVSGKDSSSSSETHQNLKSIMQGGEDLKEKSLIVNSS
DPRGFSNKKLSASAAPFNPSPVVARSAPHAMKITLPSGPRAVPAIAPWPVNMNVHPGPAT
VLPTVNPICSSPHHLYPSPPPTPNMIQPLPFMYPPYSQNQAVPTSTFPVTTSAFHPSHFT
WQCNVSPNVSEFIPATVWRGCHPVFSVPPPVVEPISDPKLETQLRPVDSGSPSSSSILPV
DIDNVGDGRKEVNLPASEEIHNANEVAEIRLESIKENGHPNLSTVENAQSEQSQKNSSNE
NAGKNGECKIDGEKTFSILIRGRRNRKQTLRMPISLLSRPYGSQSFKVIYNRVLRGSETP
KSSSFSLRDDCAASAT
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctagaaacagtcgtggaaaggcgaaaggagaaaagaagaagaaagaggagaag
gttcttccagtagtcatggatatcactgtaaaccttcccgacgaaactcgtgtcgtttta
aggggaatatcaacggacaggattattgatgttcgtcggcttttatccgtgaagactgaa
acttgcagcgtcacgaatttttcgttgtcgcatgaggtaagagggccgcggttaaaagac
acggtggacgtttccgcactgaagccgtgcgtcctcactttggtggaagaggactacgat
gaagagcgcacagtggtgcacgttagaaggctcctggacatcgtggcctgcacgacgagc
tttggcccgtcggcgacgagcaaggaaagtttaaagtccgactctactaaaaatgcgccg
ggtgcgcaggataagggtgccccggcgtccaccaagaaatccaccaccacccagactcaa
ggcccagcggccaagcaagaagcggcgatggaggaagagggagagatgagccacgccttc
cccaaacttggaaccttctacgagttcttctctctctcccacctcactccccctctccaa
tttataaggagagaaatgagacgacatgtcgatgagatttcggcggatgatcacattttc
tcccttgatgtgaagctttgcaatggaaaagtggttcatgtggaagcttgcagaaacgga
ttctacagcgttggaaagcagcggatcctttgccacaaccttgtcgatctgttacggcag
cttagtagagcctttgataatgcttacaatgatctcatgaaagcattttcagaacgtaac
aagtttgggaatcttccttacggctttagagccaacacatggcttgttcctcctgttgct
gcacaattaccctcagttttccctcctctccctgttgaagatcaaacttggggaggaaat
ggaggtggtctagggatagatggaaaaagtgatttgattccttgggctaatgagtttttg
ttgcttgcatctatgccttgcaagacggcagaggaaaggcaggttcgagataggaaggca
ttccttcttcacagcctattcgttgatgttgccattttcagagccattaaagctgtccag
catgtaacgggacatacaaatttaacttgttcagtttcgaatggcgagattctctatact
gagagcgtaggagatttgaacatcatggtcatgaaagatgcctctaatgcgagctgtaaa
gtagatactaaaattgatggaattcaagcaactggatcggatcaaaagaatctagtagaa
agaaaccttctgaaagggatcactgctgatgaaaatactgctgctcaagacattgccact
ctaggtgttatcaacgtaagatattgtggttacatcgctattgtgcaagttgcacagaga
gagaatgacaaggccagtactacatctcagagcattgaactccttgatcagcccgaagga
ggtgccaatgccctcaatattaacagtttgagattgcttcttcacaaaacaacaccttca
gagcacaataaaccagtaccacatttgcaaactttggagcatgaagaactcagtgcttcc
caaacttctgtggagagactcttggaacaaagtgttgctaagcttgaggaagaggaactg
ggatccgaccatgtcgtaagatgggaactcggagcctgttggatacaacatttgcgagac
caaaaaaatacggaaaaagataagaagccatctggtgagaaggcaaagaatgaaatgaag
gtcgaggggcttgggacaaatctcagatcccttaagaacaacaagaagaaatcagatgga
agcaatgtgaaagtgcagtctgaaagctcaagatcccatgcagaaggtattattggggaa
gctaaaatttctatattgtcttctgtagaatcgcagcttgaaaccaatgcaaaagaaaat
gagattgcaatgaagaggatattgcctgaagcagcctttgctcgactaaaagaatcagaa
actggtcttcattgcaagtctttgccagaactaattgacctgtctcagaaatattacact
gaagttgctcttccgaaactggtagcagattttggttcactggaactctcaccagttgat
ggccggactctaactgatttcatgcatacaagaggtcttcgaatgcgttgtttgggacaa
gttgtcaagctttcagaaaagctaccacatgtacaggcactctgtattcatgagatgata
gtgagagcatttaagcacattcttcaggcagtaattgctgttgttgacaacacagagaac
atggcagtatccatagctgctgcactgaatatgatgcttggggttcctgaaaatgaagaa
tcaaataaatcttgcaatgcccattcccttgtgtggagatggctcgaggtcttcttgatg
aagcgatatgaatgggatcttagtagtttgaactacaaagatgttagaaaatttgcaatt
ctacgtggattatgtcataaggtgggtattgagctggttccaagggattttgatatggat
tctccaaatccattccggaaatcagatgttgtcagcctggtcccagtttataagcaagca
gcctgctcatcagctgatgggaggcaactcctagaatcatcaaaaacagctttggataaa
ggaaaactagaagatgcagttgcctatgggacaaaggctcttgcaaagcttgtagcagtt
tgtggtccctaccatcgaatgacagcaggggcttacagcctccttgctgtagttttgtat
cacaccggagatttcaatcaggccacagtttatcaacagaaagctctggatatcaatgag
agagaactaggtcttgatcatccagatacaatgaagagttatggggatcttgctgtcttc
tattacagacttcaacacacagagctggctctcaagtatgtaaagcgtgcactgtatctt
ctacatctcacatgtggcccatctcatccaaacactgccgcgacatacataaatgtggct
atgatggaggaaggcctagggaatgtgcatgttgccctcagatatctccacaaagctctg
aagtgtaacgaaaggttactcggccccgaccatattcagacggcagcaagttaccatgca
atcgcaattgcactttcattgatggaagcataccctttgagtgttcagcatgagcaaaca
accttgcaaattctgcgagcaaagctgggcccagatgacctgcgtacgcaggatgctgct
gcttggcttgagtacttcgagtccaaggctcttgaacagcaagaagctgcacgaaatggt
actcggaagccggatgcatccatagccagcaaaggccacctaagtgtctcagatttgctt
gactacattaatccaaatgatgatgttgaagggagagatggagcagtaaagaggaaaagc
tatattacaaaggtgaagggaaaatcctatcaaaatacaagcctaggaggttctgatgaa
tctccaaaagaaacgccaaaagtggtgtcagaagaagagagacctttacctgaaacagaa
ggtagtgcagatgctaaccaggtgactggctctgtacctgtcgagtcccaaaagtctgtt
atgcaaacgactgtagaggaaaatccaaagattgccaatgaaatcttttctgaaacacat
gctgaaggagaggatggatggcaaccagttcaaaggccaagattagctggctcatctggt
cggcggcttaagcagcgccctgcaactattggcagggtctatggttatcagaagaagaat
gcggacaatgaaatggagtatactcctgtgaagaatactcttaagaatacaaagcattac
ctattaaagaaacgaacaatttctcatgggagttatacagatcaccaaacagtgaaccct
gccgaagcaaccaaatttggacggagaatagtcaaagctgtaacataccgggtcaagtcg
atgccttcatctaccaaaactgttacaacagagacctctggaaatagtggcgagctttcc
attgctccattaccttgtgcaacttctttgccaaatgatgttgctccactgaaaagttca
attgtcagtcttggaaaatctccttcatacaaggaagtagcattggccccaccaggttcc
attggtaaattgcaggtctgggtgccccaaagtgattttccagaaacccagggacttggc
tttggaaaacatgaagaggaaacgaatgaagtaaaaggaaatgacgaattaatcagaaca
ggggcagaaaatatatttgaagaggataagatttctatacctaattccgaagaccatttg
aaggaggaaataggaattactgagaagaaagaagacactaaaataaatgatgcaatggaa
gataaaccttctttaatggcatctgagagtgtggaaggacttgaatctggcagtgttgag
gttcaagaagtggtagaggctagcatattggttgatggtgttgccaaccccgttgattct
ccaaaaagtgaggtgagtgggaaggattcatctagcagttctgaaactcatcaaaatttg
aaatcgatcatgcaaggaggagaggatttgaaggagaaatccttgattgtgaactcaagt
gaccctcggggattttccaataagaagttgtctgcatcagcagctccattcaacccatca
ccagtcgttgcacgttctgcaccccatgccatgaaaattactcttccttctggtcctcgt
gctgttccagctattgcaccctggccagtaaacatgaatgttcaccctgggcctgctact
gtcctacccacagttaatccaatctgctcctcccctcaccacctatacccatcacctcca
ccaaccccaaacatgatacagccactgccctttatgtaccctccttactctcaaaaccaa
gcagtaccaaccagcacatttcctgtaacgaccagtgcctttcatcccagtcatttcacg
tggcagtgcaacgtgagcccaaatgtatcagagtttattccagctacagtttggcgtggc
tgccatcctgtgttctctgtcccaccaccagttgtcgagccaatttctgatccaaaattg
gagacacaactgcggcctgttgattctggaagcccaagttcatcttcgattctaccggtg
gatattgacaatgtgggggatggtaggaaagaagtgaatcttccagcttcagaggaaata
cataatgcaaatgaagtagctgaaatcaggttggaaagcataaaagaaaatggtcatcca
aatctgtctacggttgaaaatgctcagagtgaacaaagtcagaaaaatagctcaaatgaa
aatgctggaaagaatggtgagtgtaaaattgatggtgagaaaactttcagcattttgatt
agggggagaagaaaccgaaagcagactcttagaatgccaataagtttgctcagtcgacca
tatggctcacagtcttttaaggttatttataacagagtgcttaggggaagtgaaacccca
aagtcttccagcttttctttaagagatgattgtgcagctagtgctacgtaa
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integrated database retrieval system
