Alnus glutinosa (common alder): 133865518
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Entry
133865518 CDS
T10577
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 2
KO
K03255
protein TIF31
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
aglu03012
]
133865518
Translation factors [BR:
aglu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
133865518
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_10
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
TPR_MalT
TPR_8
CLU
PAM2
Motif
Other DBs
NCBI-GeneID:
133865518
NCBI-ProteinID:
XP_062157926
LinkDB
All DBs
Position
4:complement(32589387..32603921)
Genome browser
AA seq
1885 aa
AA seq
DB search
MAPKTGKAKPHKAKGEKKKKEEKVLPNIIEITIETPEDSQVTLKGISTDRILDVRKLLGV
HVETCHLTNFSLSHEVKGPRLKDSVDILSLKPCHLSIVEEDYTEDLAIAHIRRLLDIVAC
TNSFGPASSSPKTSGRAAQSKEPGPAEAEPSQSLSSDHGEDPTHKKPGGAQRVGGPVPNK
SGPDGTERADVAAVSMYPPPRLGQFYEFFSFSHLTPPVHYIRRSTRPFLEDKAEDDFFQI
DVRVCSGKPTTIVASRKGFYPTGKHILLSHSLVGLLQQISRAFDAAYKGLMKAFTEHNKF
GNLPYGFRANTWVVPPVVADNPSVFPPLPMEDENWGGNGGGLGRDGKHDYRQWAKEFAIL
AAMPCKTAEERQIRDRKAFLLHSLFVDVSVFKAVAAIKHLIDSNQCSLNNPTISTLHEER
VGDLIIKVTRDVPDASTKLDYKHDGSQVLGMSQEELTRRNILKGITADESATVHDTFTLS
VVVVRHCGYTAVVKVSAEVNWEGVPIPQDIDIEDQPEGGANALNVNSLRMLLHKPSTPQS
SSTSQRVQSADTESLRAARSLVRKVLEESLLKFQEEPTKQTRSIRWELGACWVQHLQNQA
SGKTESKKAEEAKPEPAVKGLGKQGGLLKEIKKKTDVKSSKAELGKEVSMNNNLDINNNQ
QELEKQDKEKEMMWKKLLPEPAYLRLKESETGLHHKLPEELTEMAHKYYTDTALPKLVAD
FGSLELSPVDGRTLTDFMHTRGLQMCSLGRVVELADKLPHVQSLCIHEMVVRAYKHILQA
VVAAVDNVADLAVSIASCLNLLLGTPSLENADVDITNDDKLKWKWVEAFLLKRFGWHWKC
ESCEDLRKFAIIRGLCHKVGLELVPRDYDMDSALPFRKSDIISMVPVYKHVACSSADGRT
LLESSKTSLDKGKLEDAVNYGTKALSKLVSVCGPYHRMTAGAYSLLAVVLYHTGDFNQAT
IYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSH
PNTAATYINVAMMEEGLGNVHVALRYLHEALKCNQKLLGADHIQTAASYHAIAIALSLME
AYSLSVQHEQTTLQILQAKLGSEDLRTQDAAAWLEYFESKALEQQEAARHGTPKPDASIS
SKGHLSVSDLLDYITPDADMKAREAQKKARAKIKGKPGQNWETVSDEYQKDEILSPSYPI
AENSSDKENTAEAQFEEPRDDKPDSSLSDQSVLITNDDVAQDDTSDEGWQEAVPKGRSLT
ARKSSSSRRPSLAKLNTNFMNVPPSSRYRGKSANFASPRTTQNEPVSSTGPAPPVTKKLA
KSASFSPKLNNSSNSTSGAEKLANPKSAPATPASTDQVAKSAPAASPISVQAAGKLFSYK
EVALAPPGTIVKAVAEQLPKGNLPKEQNLQASQEAAVTDPTLSEVTTVKDAKEEKVDNPK
RGKHLQVSKEETKGKVNEEEKREKKVDFVASKSLEVVKSAAQDIIVEGEKVELKSDAVKD
TEAETRNVAVLGVENPDISRDLKASTFKSEVLGTVGPDGCSETSPDSGSALIENTNLLPD
KDAPISEEKVADGDENNVDLGVKPKPTEGEKQDEAETGKETTKKLSAAAPPFNPSTIPVF
GSVPGFKDHGGILPPPVNIPPMLTVNPVRRSPHQSATARVPYGPRLSGGYNRSGTRVPRN
KAGFHNGEHNGDGNHFSPPPLIMNPHAAEFVPGQPWVPNGYPLSPNGYLASPNGFPMSPN
GIPVSPNGYPASVNGIPVSQNGFPVSPISSVESPPVVNVDNGVENKDEAAAEAEAEAEAS
TEKSCTEVEHEKPPIEQKSQEDQAVDNENNHPEVEEKTTDIVPVTAAGDNVVAKETCNIA
VVEEKPTKCWGDYSDSESEIVEVTS
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaaaacaggcaaggcgaaaccccataaagccaagggagagaagaagaagaag
gaagagaaagttttgcccaatataattgagattacaattgaaacaccagaagactcacaa
gtgaccctcaagggaatctccactgacaggattctagatgtgaggaagctgttaggagtc
catgtcgagacgtgtcatttgaccaacttctccttatcccatgaggtgaaaggaccccgg
ctgaaggattcggtggacatcctctccctcaaaccctgccacctctccattgtcgaagag
gactatacagaagaccttgcaatcgctcacatcaggcgactcctcgatattgtggcctgc
accaactcgtttggtcccgcgtcctcttcgcccaagacttcgggccgagcggcccagtcc
aaagagcccggtccagcggaggccgagccttctcagagcctgagctcagaccatggtgaa
gatccgacccacaagaaaccgggcggggcccagcgagttggcggccccgtgcccaacaag
agcggccccgatgggaccgagcgagccgacgtggcggccgtgtcgatgtacccgccgccg
aggctcggccagttctacgaattcttctctttctcgcatctcacgccgccggtgcattac
attcgaagatctactcgtcccttccttgaagataaagcagaagatgatttctttcaaatt
gatgttcgagtttgcagtgggaagccaacgacaattgttgcttccagaaaggggttctac
cctactgggaaacacattcttctcagtcactctttggttggtttgctgcagcagataagc
agggcttttgatgccgcgtacaaaggccttatgaaagctttcacagagcataataaattt
ggcaatcttccttacggttttcgggcaaatacatgggttgtccccccagttgttgccgat
aacccatctgttttcccgccacttcccatggaagacgaaaactggggaggaaatggcggt
gggcttggaagagatggaaaacatgattacagacagtgggcaaaggagtttgccattctg
gcagcgatgccttgtaaaacggcagaagaaaggcaaattcgagatcggaaagcctttctg
cttcacagtttatttgtcgacgtgtcagtctttaaagctgttgcagcaatcaagcatctt
attgacagtaatcaatgctctttaaataatcccaccatttcaaccttgcatgaggaaagg
gttggagatttaattattaaggtgacaagagatgtacctgatgcaagcacgaagttggat
tacaaacatgatgggagtcaagttcttggaatgtcacaggaagagcttactcggagaaat
atacttaaaggcataactgctgatgagagtgctactgttcatgatacttttactttaagt
gttgtggtcgttagacattgtggctatacagctgttgtgaaagtttcagctgaggtgaat
tgggagggtgttcctattccccaggacattgacattgaggaccagcctgaaggaggtgcc
aatgccttgaatgtcaacagcttgagaatgctattacacaagccatccacgcctcaatca
tctagtacaagtcaacgagtacagagtgcagatactgaaagtttacgtgctgctaggtct
ttggttaggaaagtattagaagaaagtttgctgaagtttcaggaagagcccactaaacag
actaggtctatcagatgggagctcggagcatgttgggtgcaacatttgcaaaaccaagct
tcagggaaaactgagtctaagaaagctgaagaagctaagcctgagccagctgtaaagggc
cttgggaagcaaggaggactgcttaaggagataaagaagaaaacagacgtcaaaagcagc
aaagctgaactggggaaggaagtttctatgaataacaaccttgacataaacaataatcag
caggaattggagaaacaagataaggagaaggaaatgatgtggaaaaagctacttcctgaa
ccagcatatttacgccttaaagaatcagagaccggtcttcatcataagctgcctgaggag
ttgactgaaatggctcataaatactatactgatactgcacttccaaagctggtggcagat
tttgggtcccttgaactttcaccagttgatggaagaacgttgacagattttatgcatacc
aggggtttgcaaatgtgttccttagggcgtgtggttgaacttgcagataagcttcctcat
gttcaatcactctgtatacatgagatggttgttcgagcctacaagcacatattgcaagct
gttgttgcagcagttgataatgtcgctgacttggctgtgtcaatagcatcgtgtttaaat
ttattattaggaacaccatcacttgaaaacgctgatgtggatattactaacgatgacaag
ttaaaatggaagtgggtggaagcattccttttgaagaggtttggttggcattggaaatgt
gaaagctgtgaggatctgagaaagtttgccattatccgtgggctgtgccacaaggttgga
cttgagcttgttcctagggactatgatatggacagtgcattaccttttaggaagtcagat
atcattagcatggtccccgtttacaagcatgttgcatgttcctctgctgacgggcgtaca
ttgttggagtcttccaaaacttccttggacaaaggcaaattggaggatgctgttaattat
ggcacgaaggcactctcaaaacttgtgtctgtctgtggtccttatcatcgaatgacagct
ggagcatatagtcttctggctgtagttctctaccatacaggggattttaatcaggcaacc
atttatcagcaaaaagcattggatattaatgagagagagcttggactcgatcaccctgat
acaatgaaaagttatggagatctagctgttttttactatcgacttcagcacacagagttg
gccttgaagtacgtcaatcgtgctctttatctcttgcacttaacatgtgggccttctcat
ccgaatactgctgccacttacatcaatgtagcaatgatggaagaaggtttggggaacgtc
catgttgctcttaggtatctccatgaggcattgaaatgtaaccaaaaactacttggggct
gatcatatacagactgctgccagttatcatgcaatagcaattgctctctctttgatggag
gcatactccttaagtgttcagcatgaacagactaccctacagatactgcaggccaaacta
gggtctgaggatctacgaacacaggatgctgctgcatggcttgagtactttgagtccaag
gctctggagcaacaagaagcagcacgccatggtaccccaaaaccagatgcctcaatctcc
agcaaaggtcatttaagtgtatcggaccttttggattatataacaccagatgcagatatg
aaagcgagagaggcccaaaagaaagctcgtgccaagattaaaggcaaaccaggccaaaac
tgggaaacagtctcagatgaatatcagaaggatgaaattttatcgccaagttatcccatt
gcagaaaattcaagtgacaaagaaaacacagccgaagctcagtttgaagaacctagagac
gacaaacctgattcaagcctttctgatcaatcagtactgataacaaatgatgatgtggcg
caagatgacacctctgatgaaggatggcaagaagccgttcctaaaggtcgctcacttaca
gctcgcaagtcttctagttcaaggaggccaagcctagcaaaactaaatacgaacttcatg
aatgtacccccatcatcaagataccgtggaaagtctgctaatttcgcatccccaagaaca
acccaaaatgagcctgtttcttcaactggacctgctccacctgttacaaagaagttggcc
aagagtgcaagcttcagtcctaagttgaataactctagcaactcaactagtggggcagag
aaattagccaacccaaagtcggcccctgctaccccagcttccactgatcaagttgctaag
tctgctcctgcggcaagtccgatcagtgttcaggcggctggaaaacttttctcctacaaa
gaagttgctttggctccacctggaacaattgtgaaggcagtggcagaacagttgccaaaa
ggaaatcttcccaaagaacaaaatcttcaggctagccaggaggcagctgtgacagatccc
actcttagcgaggtgacgacagtaaaggacgcaaaggaagaaaaagttgataaccccaaa
agagggaaacatctacaggtttctaaggaggaaacaaaaggcaaggtcaatgaagaagaa
aaacgagaaaagaaagttgactttgtggcatcaaaatcccttgaggttgtaaagagtgct
gctcaagatatcatagtggaaggtgaaaaagtagaattaaagagtgatgctgttaaagac
actgaagcagaaactagaaatgttgcagttctcggagttgagaatcctgatatctctcgg
gatttgaaggccagtactttcaaaagtgaagtgttgggaacagtggggccagatggttgc
tcagaaacttctcctgattctggatctgctttaattgaaaacacaaatcttttgcctgat
aaagatgcccccatttctgaagaaaaggtcgcagatggagatgaaaataatgttgactta
ggtgttaagccaaagccaactgaaggagaaaagcaagatgaagcagaaaccggaaaggag
acaaccaagaaactttctgctgctgcacctccatttaatccatccacaattccagtcttc
ggctcggttccaggattcaaagatcatggaggaattctgcccccaccagttaatattcct
cctatgcttacagtcaatcctgtccgtagatcacctcatcaatcagcaacagcgagggtt
ccatatggtccccgactatccggtggctataacagatcaggaactcgagttccacgcaat
aaagctgggttccacaatggcgaacacaatggagatgggaatcacttcagccctcctcct
ttaataatgaacccacatgcagctgagtttgtacctggccaaccttgggttcccaatggc
tatccactatctccaaatggttatttggcttctccaaatggttttcccatgtccccaaat
ggtattccagtgtcaccaaatggatatccagcatcagtaaatggtattccagtgagtcaa
aatggatttccagtatctccaatcagttcggtagaatcaccaccagttgtaaatgttgac
aatggtgttgaaaacaaagatgaagctgcagcagaagcagaagcggaagcggaagcaagt
actgagaagtcatgtacagaggttgaacatgaaaaaccaccaattgagcagaaatcgcaa
gaagatcaagctgtagacaatgaaaacaatcatcctgaagttgaagaaaagactacagat
atagtcccagtcactgctgctggtgacaatgttgtggcaaaagaaacttgcaatattgca
gtggttgaggaaaaaccaaccaaatgttggggagattacagtgacagcgaatctgagatt
gttgaagttacaagttga
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