Alnus glutinosa (common alder): 133865733
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Entry
133865733 CDS
T10577
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aglu04131
]
133865733
Membrane trafficking [BR:
aglu04131
]
Protein recycling
Others
EARP complex
133865733
Endosome - Golgi transport
Tethering complex
GARP complex
133865733
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
RINT1_TIP1
COG7
COG4_N
MUN
Vps54_N
Motif
Other DBs
NCBI-GeneID:
133865733
NCBI-ProteinID:
XP_062158172
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Position
4:7718339..7738460
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AA seq
822 aa
AA seq
DB search
MDKSSALEYINQMFPTEASLSGVEPLMQKIHSEIRRVDAGILAAVRQQSNSGTKAKEDLA
AATRAVEELMYKIREIKSKAEQSEMMVQEICRDIKKLDFAKKHVTTTITALHRLTMLVSA
VEQLQILASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKITELREKFKNIKQILKSHVFSD
FSSLGTGKETEETNLLQHLSDACLVVDALEPSVREELVNNFCSRELTSYEQIFEGAELAK
LDKTERRYAWIKRRIRTNEEIWKIFPPSWHVPYRLCIQFCKKTRKQLEEILDNLKEKPDV
GALLLALQRTLEFEDELAEKFGGGARSMEIGNEIEEIGRGENTSQSVLDIRKKYERKFAA
HQGTGTEEKDGKKDLSVPGAGFNFRGIISSCFEPHLIVYVELEEKTLMENLEKLVQEETW
DIEEGSQNNVLSSSMQLFLIIKRSLKRCSALTKNQTLFNLFKVFQRILKAYATKLFARLP
RGGTGIVAAATGMDGQIKTSDRDERVMCYIVNSAEYCHKTSGELAESVSKIIDTQLVDGV
DMSEVQDEFSAVITKALVTLVHGLESKFDAEMAAMTRVPWGTLESVGDQSEYVNGVNMIL
ASSIPVLGRLLSPVYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTIL
LDIPSLGRQTSGAANYSKFVSREMSKAEALLKVILSPFDSVADTYRALLPEGTPMEFQRI
LELKGLKKADQQSILDDFVKRGPGITQPSIVASVVPATPTAPAAPAIPNMASLGLIASRE
DVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNP
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtcaagcgctttggagtacatcaaccagatgttccctacagaggcatcttta
tctggtgttgagccactcatgcaaaagatacacagtgagattcgtcgtgtggatgctgga
atactagcagctgttcgtcaacagagtaattccggaaccaaagccaaggaggatcttgct
gctgctacgcgtgctgtggaggaactcatgtataagatccgagaaataaaaagcaaagct
gagcaaagtgaaatgatggttcaggaaatatgccgcgacattaaaaagttggactttgca
aagaagcatgtaacaactacaattacagctcttcatcgtcttaccatgctagtctctgct
gttgagcagcttcaaattttggcttcaaaacgacaatataaggaggcagctgcacagcta
gaggctgtgaaccaattatgtagccactttgaagcctatagggatattccaaagatcaca
gaactcagggagaagtttaagaatatcaaacaaattcttaagtcacatgtgttttctgat
ttctccagcttaggtactggaaaagagacagaagaaactaatttactacagcatttatct
gatgcctgcttggttgttgatgctttggagccatctgtgagggaagagttagtaaacaat
ttttgcagccgggaacttacttcgtatgaacaaatttttgaaggagcggaattggctaag
ttggataaaactgaaaggagatatgcatggatcaagcgtcgaataagaacaaatgaagaa
atctggaagatctttcctccttcatggcatgttccttatcgcctatgcatccagttttgt
aagaaaacgaggaaacagctcgaggagatcctggataatctgaaagaaaaaccagatgtt
ggggctttattgttggcactacaacgaactctagaatttgaggatgaattggctgagaaa
tttggtggaggcgcgcgaagcatggagataggtaacgagattgaggaaataggcaggggc
gaaaatactagtcaaagtgttttagatattcgaaagaagtatgaaaggaagtttgctgca
catcaaggaactggaactgaagaaaaggatggaaagaaagatttgtcagtgcctggagct
gggttcaacttccgtggaatcatatcatcttgctttgaacctcacttgatagtgtatgta
gaactggaagagaagacattgatggagaatctggagaaacttgttcaggaggagacgtgg
gatatagaggagggaagtcagaataatgttttatcaagtagcatgcagttgtttctaata
atcaagaggagcttaaagagatgcagtgctctaacaaagaaccagacattatttaatttg
ttcaaggtgtttcaaagaattctcaaagcatatgcaacaaaactttttgcaagactacct
aggggtggaactggaatagttgcagccgccacgggtatggatggacagataaagacctct
gacagggatgaaagggtgatgtgttatattgtgaattcagctgaatattgtcataaaacg
tctggtgaattggcggaaagtgtatctaaaataatcgacactcaattagtggatggagtg
gatatgtcagaagtgcaggatgaattttcagcggttataacaaaagcattggtaacccta
gtgcatggcctggaaagtaaatttgatgctgaaatggctgcaatgacacgtgttccatgg
ggtacccttgaaagtgtcggtgaccaatcagagtatgttaatggcgtaaatatgatcctt
gctagtagcattcctgtacttggaagacttctttcacccgtttacttccaattcttcttg
gacaagcttgcatcttctcttggtccccgcttttatgcgaacattttcaaatgcaagcac
atatcagaaactggagcccaacaaatgttattggacactcaagcagtaaagacgattctt
ctggacattccttcacttggtcgacaaacttctggtgctgctaactattcaaaatttgtg
agccgtgaaatgagcaaagctgaagcacttttgaaggttatactgtccccatttgattcc
gtggcggatacctatcgagcattgctaccagagggaacaccgatggagtttcagcgtatt
ctggagcttaagggccttaaaaaagctgatcagcaaagtatattagatgacttcgtcaaa
cgtgggccagggatcacgcaaccatctatcgtggcatcggttgtcccggctacccctact
gcccccgcggctcctgcgataccgaatatggcttcattaggactaattgcttcccgagag
gatgtgctaaccagagcagctgctcttggaagaggtgcagctacgacagggttcaagagg
ttccttgctttaactgaagctgcaaaagatcgaaaagatgggcccttcagaaagctcttt
aatccttga
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