Alnus glutinosa (common alder): 133865866
Help
Entry
133865866 CDS
T10577
Name
(RefSeq) SWI/SNF complex subunit SWI3C isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133865866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aglu03021
]
133865866
03036 Chromosome and associated proteins [BR:
aglu03036
]
133865866
Transcription machinery [BR:
aglu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133865866
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133865866
PBAF complex
133865866
GBAF(ncBAF) complex
133865866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Zn_ribbon_2
DUF4923
CLP1_P
Motif
Other DBs
NCBI-GeneID:
133865866
NCBI-ProteinID:
XP_062158355
LinkDB
All DBs
Position
4:2483079..2491745
Genome browser
AA seq
799 aa
AA seq
DB search
MPASPSFPSETRTRWKKRKREPQISRRAPKHEDDDEDEEEPPPAHDDDGVELQDDPDEPQ
SGAVSLHESEVLSDGGARVCDFPLVVKHTVNRPHSSVMAIVAAERANQSGESGKRAQQLH
AALLALENVSYGQLQALSAVPADAPVFDQDRTDGAVSGSSFVITPPQIMEGRGVVKRFGS
RVLVVPMHSDWFSPATVHRLERQVVPHFFSGKSPDHTPEKYMECRNYIVAKYMENPEKRL
MVSDCQGLVVGVDNEDLARIVRFLDHWGIINYCAAAPSCEPRNGGSYVREDLNGDIQVPS
AALKSIDSLIKFEKPKCRLKVADVYSSLSSHDAHASDLDNRIRERLSENHCNCCSRALPT
VYYQSQKEIDTQLCSNCFQEGRFVTGHSSIDFISVDATNDYGDPDGENWTDQETLLLLEA
MEIYNENWNEIAEHVSTKSKAQCILHFLRLPMENGLLENIEVPGMSSNSLNGDDCGRSNS
NYNGDSAGSCHQDANSESRLPFANSGNPVMALVAFLASTIGPRVAAACAHASLAALSEGN
GLSASGRNLQLEGSGHGNRMNSESIHSRESGRHGVIANSIQQKASEENSGLHGSWNQNEA
QVPLSAEKVKAAAKAGLAAAATKAKLFADHEEREIQRLSANIVNHQLKRLELKLKQFAEV
ETFLMKECEQVEKTRQRIAAERARLISARCGPAGVTSPMGVPGAGPSMVNNNASNRQQIV
SAPPSQPSIPGYGNNQTVHPHMPFMQRQQMFGLGPRLPMAAIQQSSAASNVMFNASGNAQ
PTLNHPMLRPVSGTNSGLG
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttccccttccttcccctcggagacccgcacgcgatggaagaagcgaaagaga
gagccccaaatcagccggagagcaccgaagcacgaggacgacgacgaagatgaggaagag
ccccctcccgcccacgacgacgacggcgtagaactacaggatgatcccgacgagccgcaa
tccggcgccgtttcgctccatgagagcgaggtcctctccgacggtggggcccgcgtctgt
gacttccctctcgtggtcaagcacacagtgaatcggccccactcctcggtcatggccatc
gtggccgcagagcgggccaatcagagcggagagagcggcaagagggctcagcagctccac
gctgctttgctggccttggagaacgtgtcgtacgggcagctccaggcgctttccgccgtg
cccgcggatgctccggtgttcgatcaggatcggacggatggcgccgtttccggatcgtcc
tttgtgatcacgccgccccagatcatggaaggtcgcggcgtcgtcaagcggttcgggagc
agggttctcgtggtcccaatgcattcagattggttttcaccagccactgtgcatcgactg
gagaggcaagtggtgccacatttcttctctgggaaatcaccagaccacacgccagagaaa
tacatggaatgtaggaactacattgttgccaaatacatggagaatccagaaaagaggctc
atggtctctgattgccaaggattggtagttggcgttgataatgaagatttagctcggatt
gttcggtttcttgatcactggggaatcatcaattactgtgctgcagcaccaagttgtgag
cctcggaatggtgggtcctacgtaagggaggatctaaatggtgatatccaagtgccatca
gctgctctaaagtccattgatagtttaatcaaatttgagaagcccaaatgtaggctcaaa
gtggctgatgtttattcatcattgtcatcacacgatgctcatgcctctgatttggacaac
agaatccgagagcgtctatctgaaaatcactgcaattgttgttctcgggctcttcccacg
gtttactatcagtcacagaaggagattgatacgcaactgtgctctaattgcttccaagag
gggaggtttgttactggtcattcaagcatagattttataagcgtggatgcaacaaatgat
tatggtgacccagatggggaaaactggaccgatcaggaaacattacttctacttgaggca
atggagatttacaacgagaattggaatgaaattgcagagcatgttagtaccaagtcaaaa
gcacaatgcattcttcactttcttcgtctacctatggagaatggcctactggaaaatatt
gaagttccaggcatgtcatctaactcgttaaatggagatgattgtggaagatcaaattca
aattataatggggattcagcaggatcctgccatcaagatgccaattctgaaagcaggctc
ccttttgcgaattccgggaatccagttatggccctggttgcttttttggcctctactatt
ggaccaagagttgctgcggcatgtgcacatgcgtccttggcagcattgtccgagggcaat
ggcttatctgcttctggaagaaatttacagctggaaggttctgggcatggtaataggatg
aattcagagagtatacatagcagagaaagtggtcgtcatggagtaattgcaaattcaatc
cagcaaaaagcttcagaggagaactctggactacatggttcatggaatcagaatgaggca
caggttccattatctgcagagaaagttaaagctgctgctaaagctggccttgctgctgca
gcaacaaaagcaaaattgtttgcagatcatgaagaacgggaaattcaaaggctatctgca
aatatagtaaaccatcagttgaagagattggagctgaagctgaagcagtttgctgaagtg
gaaacgtttttgatgaaagaatgtgaacaagtggagaagacaaggcagaggattgctgct
gaacgggcccgcttgatatcagctcgatgtggacctgctggcgtcacttcacccatgggc
gtaccaggtgctggtccttctatggtgaacaataacgccagcaataggcaacaaattgtc
tcagctccgccttcacaaccaagcattccaggatatggcaacaatcaaacagtccatccc
cacatgccgtttatgcaacggcagcaaatgtttgggttggggccaaggctgcccatggca
gcaatacagcagtcctcagctgcttcaaatgtcatgttcaatgcctctggtaatgcgcag
cctactctgaatcatccgatgctgcgacccgtatctggtactaactctggtttaggttga
DBGET
integrated database retrieval system
