Alnus glutinosa (common alder): 133865877
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Entry
133865877 CDS
T10577
Name
(RefSeq) F-box protein SKP2B-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133865877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aglu04121
]
133865877
Ubiquitin system [BR:
aglu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133865877
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Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
133865877
NCBI-ProteinID:
XP_062158367
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Position
4:4908764..4913746
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AA seq
374 aa
AA seq
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MVGKDNLKTEDLNLCFEKLMMLGGSGIGKGGVKMEGGVINEWKDIPMELLLQIVSLVDDQ
TVVVASGVCRGWRDAICLGLTHLSLSWCSKNMNNLVLSLAPKFTKLQSLILRQDKSKLED
NAVETIANCCHDLQVLDLSKSFKLSDCSLYALARGCPNITELNISGCSAFSDSALAYLPR
FCRKLKVLNLCGCVKAASDSALQAIGRYCSQLQRLNLGWCENVSDVGVMSLAYGCPDLRT
LDLCGCVLITDDSVIALANKCIHLRSLGLYYCQNITDRAMYSLAHSRVKNNKTSIWESLK
GMNDEEGLKNLNIGQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCACAV
HAHRTFIPFPHPAH
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggtcggtaaagacaacttgaagactgaggacttgaacttgtgctttgagaagcttatg
atgcttggtggaagtgggattggtaaagggggagtgaaaatggaaggtggtgtcatcaat
gagtggaaggatattcctatggagctcttgttgcaaattgtttcgcttgttgacgatcag
acggtggtcgtggcatctggagtgtgtcgtgggtggagagatgctatttgcttgggtctt
acccatctctctctctcatggtgcagcaagaacatgaacaacttggtcctatctcttgct
cccaagttcacgaaattgcagagtctgatactgcgccaagataaatcaaagcttgaggat
aatgctgttgaaactattgcaaactgctgtcatgatctgcaggtcctggatctcagcaaa
agcttcaagcttagtgactgctccctatatgccctggctcgtggttgtcctaatattact
gaactcaacatcagtgggtgttcagccttcagtgacagtgctcttgcatatctgcctcgt
ttttgcagaaagttaaaagttttaaatctttgtggatgtgtcaaagctgcatctgacagt
gcattgcaggctattggacgctactgcagtcagttgcaacgtttaaatctgggatggtgt
gagaatgtaagtgacgtgggagtgatgagtttggcgtatggatgccctgatctcagaacc
cttgatttgtgtggctgtgtccttataactgatgatagtgtcattgctcttgcaaacaaa
tgtattcatctgagatcccttggcctgtactactgtcagaacatcacggacagagcaatg
tactctttggcccacagcagagtgaagaacaacaagacttcaatttgggaatcgctgaaa
ggaatgaatgatgaggaagggctcaagaatctcaacatcggccagtgcacagcactcacc
ccccctgctgttcaagcagtgtgcgattcatttcctgcgctccacacttgctcagggagg
cattcacttatcatgagcggctgcttgaacttaatgtctgtacattgtgcctgtgctgtc
catgcacaccgcacattcatccctttccctcacccagctcattga
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