Alnus glutinosa (common alder): 133866007
Help
Entry
133866007 CDS
T10577
Name
(RefSeq) ubiquitin receptor RAD23c-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
aglu
Alnus glutinosa (common alder)
Pathway
aglu03420
Nucleotide excision repair
aglu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133866007
09124 Replication and repair
03420 Nucleotide excision repair
133866007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
aglu03051
]
133866007
03400 DNA repair and recombination proteins [BR:
aglu03400
]
133866007
Proteasome [BR:
aglu03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
133866007
DNA repair and recombination proteins [BR:
aglu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
133866007
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
UBA_RAD5A
UBA_Ucp12
CUE
NQRA_N
UBA_3
Rad60-SLD_2
Dsc3_N
SIP1
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
133866007
NCBI-ProteinID:
XP_062158538
LinkDB
All DBs
Position
4:complement(1519538..1526807)
Genome browser
AA seq
423 aa
AA seq
DB search
MKIFVKTLKGTHFEIEVKPEDAVADVKKSIENVQGADVYPAAQQMLIHQGKVLKDGTTLV
ENKVAENSFVVIMLSKSKSSSGEVSNTSTAATSKTSQTSAPPPTTPASTASQAPVVTAES
PVTVSAPAPAPAPAPAPAPATAPAPASAPAPAPVPVPVPVPVPVPISSTTAASETDVYGQ
AASNLLAGNNLEGAIQQILDIGGGTWDRDTVVRALRAAFNNPERAVEYLYSGIPEQAEVP
PVARVPASGAPANSPVQPPQPAQPAAVPSSGPNANPLDLFPQGLPNMGSGAAAGASTLDF
LRNSQQFQALRAVVQANPQILQPMLQELGKQNPNLLRLIQEHQADFLRLINEPMEGGEGN
ALGQLAAGMPQAITVTPEEREAIERLEAMGFDRATVLEVFFACNKNEELAANYLLDHMHE
FED
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttcgtgaagactctgaagggcactcactttgaaatcgaagtgaagcctgaa
gacgcggttgctgatgtgaagaagagtatagaaaatgttcaaggtgcggatgtttatcct
gctgcacaacagatgcttatccatcaaggaaaagttcttaaagatggcactacattggtt
gaaaacaaagttgctgaaaatagttttgttgtgatcatgttatcaaagagtaagagctca
tctggcgaggtttctaacacatcaactgctgctacaagcaagacctcacagacaagtgcc
ccgcctcctacaaccccagcatcaacggcatctcaagctcctgtagtaaccgcagagtcg
cctgtgactgttagtgctccggccccagccccggccccggccccagctccagcccccgcc
acggccccagcccccgcctcggccccagccccagcccccgtccccgtcccagtcccagtc
ccagtcccagtccctatctcttctaccactgctgcgtctgagaccgatgtttatggccaa
gcagcgtctaatctacttgctggaaacaacttagagggagcaattcagcaaattcttgat
attggaggagggacttgggatagggatactgttgttcgtgcacttcgtgctgctttcaac
aacccagagagagctgttgaatatttatattcgggtatccctgagcaagctgaagttcct
ccagtggcccgagtccctgcaagtggggcacctgcaaattctccagtccagcctccgcaa
ccagcgcaaccagcagctgttccttcaagtggaccaaatgctaatcctttagacctcttt
ccccagggccttcccaacatgggctcaggtgctgctgctggtgcaagtacccttgatttt
ttgcgcaatagtcagcagtttcaagccttgcgagctgtggttcaggctaatccgcaaata
ttgcagcctatgcttcaagagcttgggaaacaaaatcccaaccttctgaggttaattcaa
gagcatcaggctgacttccttcgcctgattaatgaacctatggaaggtggagaagggaac
gcactggggcagctggcagcaggaatgccacaggctataacagtcacccctgaggagcgt
gaagccatagaacgacttgaagcaatgggcttcgatcgagcaaccgtattggaggtgttt
tttgcctgtaacaagaacgaggaactggctgccaattaccttcttgatcacatgcatgag
ttcgaggattga
DBGET
integrated database retrieval system
