Alnus glutinosa (common alder): 133866015
Help
Entry
133866015 CDS
T10577
Name
(RefSeq) DNA mismatch repair protein MSH2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
133866015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aglu03400
]
133866015
DNA repair and recombination proteins [BR:
aglu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
133866015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
133866015
NCBI-ProteinID:
XP_062158551
LinkDB
All DBs
Position
4:complement(26829873..26856294)
Genome browser
AA seq
942 aa
AA seq
DB search
MEENFEEQNKLPELKLDAKQAQGFLSFFKAIPHDPRAVRFFDRRDYYTAHGENATFIAKI
YYHTTTSLRQLGSGSDALSSVTISKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSG
TPGNLGSFEDVLFANNEMQVSPVVVALSPNFRENGCTVGLAYIDLTKRVLGLAEFLDDSQ
FTNVESALVALGCKECLLPVESAKSSESRSLHDALTRCGVMLTERKKTEFKARDLVEDLG
RLVKGSKEPVRDLISVFEFAPGALGALLSYAELLVDESNYGNYTICRYNLDSYMRLDFAA
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHVWLKQPLLDVKEINSRLDLVEAF
VEDAALRQDLRQHLKRISDIERLMHNLEKKRAGLQHIVKLYQSSVRLPYIKSALEHYEGH
FSSLIKDRYLDPLDCWTDDDHLNKFIGLVEASVDLDQLENGEYMISSSYDPALSALKDEQ
ESLERQIHNLHTQTANELDLPLDKALKLDRGTQFGHVFRITKKEEPKIRKKLTTQFIVLE
TRKDGVKFTNAKLKKLGDQYQKKLEEYKNCQKELVDRVVQTAATFSEVFGSLAGLLSELD
VLLSFADLASSCPTPYTRPDITPSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISVRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
FHELTALTHENPDHEPHKKQNVGVANYHVSAHIDSSSRKLTMLFKVEPGACDQSFGIHVA
EFANFPESVVALAREKAAELEDFSPTAIISNDAQEEVGSKRKRECDPDEMSRGAARAHQF
LKEFSDLPLEKMDLKQALQQVNKLKEELQKDAVNCRWLQQFF
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaattttgaggagcagaacaagcttcctgagctgaaactggatgctaagcag
gctcaagggtttctctcattcttcaaggcgataccccatgacccaagggctgtacggttc
tttgatcgcagggactactatactgctcatggtgaaaatgcaacctttattgcaaagatc
tactatcatactactacttctttgcgacaattgggtagcggatctgatgccctttcaagt
gtaactattagcaaaaacatgttcgaaacaattgcccgtgatctactcttggagagaaca
gaccatactcttgagctctatgagggtagtggttcaaattggagactggtgaaaagtgga
actcctggaaatcttggcagttttgaagatgttttgtttgccaacaatgagatgcaggtt
tccccggttgttgttgcactatcacccaacttccgtgaaaatgggtgcactgttggatta
gcttacattgatctaactaagagagtacttgggttggctgaatttcttgacgatagccaa
tttacaaatgtggagtcagctttagttgctcttggttgtaaggaatgccttctgcctgtc
gagagtgctaaatccagtgaaagtagatccttgcatgatgctttgactagatgtggtgtg
atgttaactgagagaaagaaaactgagttcaaagcaagggacttagtggaggatcttggt
aggcttgttaaaggttctaaagaaccggttagagacttaatttctgtatttgaatttgca
cctggtgccttgggggcattactgtcttatgctgaattacttgtagatgagagcaattat
gggaactatacgatctgcaggtacaatctcgacagctatatgaggttagattttgctgct
atgagggcactgaatgtcctggaaagcaagacggatgccaacaaaaatttcagtttgttt
ggtctcatgaatagaacttgtactgctggtatgggaaaacggttattgcacgtgtggctg
aagcagcctttattagatgtaaaggaaatcaactccaggttggatttggtagaagcattt
gtggaggatgctgcacttcgtcaagatctgaggcagcacctgaaaagaatatcagacatt
gagcgactgatgcacaatcttgagaagaaaagagccggtttgcagcatattgtaaaactt
tatcagtcaagtgtaagacttccctacattaaaagtgccctggaacattatgagggacat
ttttcctccctgatcaaggacaggtatttggatcccctagattgctggactgatgatgat
cacctgaataagttcattggccttgtagaagcttctgttgaccttgatcaacttgagaat
ggggaatacatgatttcttccagttatgatcctgcactctctgcgctgaaagatgaacaa
gagtcactggagcgccaaatacacaatttacatacacaaactgctaatgaacttgatctg
cccctagataaggcgttaaagttagataggggcacacagtttggacatgtttttagaatt
acaaagaaagaggagccaaaaataaggaaaaagctcactactcaatttatcgtccttgaa
acccgaaaggatggagttaaatttacgaatgcaaagcttaaaaaattaggtgaccagtat
caaaagaaacttgaggagtataagaattgtcagaaagagctggtcgaccgtgtagttcaa
actgcagcaacattctctgaggttttcggttctttagctggattgctttctgagttggat
gtcttacttagttttgctgatttggcttctagctgtcctactccttacacaagaccagac
atcaccccctcggatgaaggagatattatcttagaagggagcagacatccttgtgtggag
gctcaagactgggtgaattttataccaaatgattgtaaacttgtcagggggaaaagttgg
ttccaaatcatcactgggcctaacatgggtggaaaatccacatttattcggcaggtcggt
gtgaatattctgatggcacaagttggttcttttgttccatgtgacaaagctagcatttct
gtacgtgattgcatttttgctcgtgtgggtgctggtgattgccaattacgtggagtttct
acctttatgcaagaaatgcttgaaactgcatcaatattgaaaggagctacagataagtca
ttgataatcattgacgagttgggccgcgggacatcaacttatgatggatttggtttagct
tgggccatctgtgagcatcttgttgaagtgatcaaagcacccactttatttgcgacccac
tttcatgaactgactgcattaactcatgaaaatcctgatcatgagccccataagaagcaa
aatgttggtgtggcaaactaccatgttagtgcacacattgactcatcaagtcgcaaattg
actatgctttttaaggttgagccaggggcttgtgatcaaagttttggcatccatgttgca
gaatttgcaaactttcctgaaagcgttgttgcccttgctagagaaaaggctgctgaattg
gaagatttctcacctactgcaatcatttccaatgatgctcaagaagaggtaggatccaaa
cgaaagagagagtgtgatcctgatgagatgtctagaggcgctgcccgggctcaccagttt
ctgaaggagttctctgatctcccgttagagaaaatggatttgaagcaggctctgcaacaa
gtaaacaaattgaaggaggaattgcagaaggatgcagtaaactgtcgctggctccagcaa
ttcttctag
DBGET
integrated database retrieval system
