Alnus glutinosa (common alder): 133866021
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Entry
133866021 CDS
T10577
Name
(RefSeq) protein argonaute 5-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133866021
03036 Chromosome and associated proteins [BR:
aglu03036
]
133866021
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133866021
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133866021
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133866021
microRNA pathway
RISC loading complex
133866021
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
133866021
NCBI-ProteinID:
XP_062158568
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All DBs
Position
4:25169221..25175913
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AA seq
979 aa
AA seq
DB search
MPRRRRGRQPDPRRDQPSPAAHQGGGGGRGGDGGGRGHVDPSGFSPAPPPTVSFTVAPPP
AASFPASPFPTVAPAAVSPAGPPLPALASWDSSEASSSARPPVSDSTSAAALSCEIAKRP
GCGTIGKRIVVRANHFLVEVADRDLHHYDVSITPEVTSLKINRLIISQLVKLYKESHLGK
RSPAYDGWKRLYTAGPLPFMSMDFVIKLIDNNVRASSSGSVRKERKFIVTIKFASKVDIH
HLRQFLSDRQLDAPRETIRALTVVLRAVPLQMFNVMGLSFFHPQLGQTGELGNGIEYWRG
YYQFLRPTQMGLSLTVDVSARAFYEPILVTEFVAKYFNFNFSRQLPDQDRLKIKKALRGV
QIEVTHRECFKSYKVSGVTTQPTNQLTFTLDDKKTKMSVAQYFCDKYNIELQNVNLPALQ
AGCDSKPIYLPMELCKIATGQRYSKRLNDRQVTNLLRANCQRPQERENSIKEMVRRTNFD
GNSIVNKEFGIQVRDEHSLVDARVLPSPMLLYHNTGSEQTEQPRMGQWNMINKRMINGGR
VEFWTCVNFSRQVNRDLAFEFCDQLIDMCNSKGMVFNPNPLLPIRSAYSIQVDMPLRDIH
KQCVAKFKEIGQAGKQLQLLIIILPDIMGSYGKIKQVCETELGIVSQCCQPKQASKLSMQ
YLENVALKINVKVGGRNTVLNDAIQRNIPLVTDRPTIILGADVIHPQLGDFSSPSIAAVV
ASMDWPEVATYRGIFSAQPHREEIILDLYKSFQDPQRGLVHEGMLRELLIAFRKSTNHKP
HRIIFYREGVSEGQFSQVLLYEIDAIRKTFFQACLSLEDGYLPPVTFVVVQKRHHTRLFP
ADHRNREQTHRSGNILPGTVVDTKICHPTGFDFYLNSHAGTQGTSRPAHYHVLYDENGFS
ADSLQMLTNNLCYTHARCTRSVSIVPPVYYAHLAAVRARYYIEGEASDSGSTSESDQDRV
EIRPLPLVKDNVKDVMFYC
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtcgacgccgtggcaggcaacctgaccctcgccgggaccagccgtctccggca
gctcatcaaggcggtggtggtggacgaggcggagatggaggaggaagaggccacgttgat
ccttcaggcttctctccggctcctccaccgaccgtttcttttacggtggctcctcctccg
gctgcttcttttccggcgtctccttttccgaccgtagctccagctgccgtttctccggct
ggacctcctctgccagctctagcttcatgggattcttctgaggcgtcgagctcggctcgg
ccaccggtttcagattcgacctcggcggctgctctgagctgtgaaatcgcgaagaggccc
gggtgcggaaccatcggaaagagaatcgttgtccgagcaaatcattttctggtggaagtc
gcggacagagatctccatcactacgatgtttccatcacacctgaggttacttcactgaaa
atcaacagacttataattagccagctggttaagttgtacaaggagtcacacttgggtaag
cgaagtcctgcatatgatggctggaagagactctatacggcagggccattgccgtttatg
tcgatggactttgttatcaagttaattgacaataatgttcgtgcctcctcatctggttca
gtgagaaaagaacgtaagttcatagtgacaatcaagttcgcttctaaggttgacattcat
catcttcgacagtttttgagcgataggcagctggatgctccaagagaaaccatacgagct
cttactgtggttcttagagcggtaccattacagatgttcaacgttatggggttgtcattt
ttccatcctcagttgggtcaaacgggtgagctgggtaatggtatagaatactggagaggg
tattatcagtttcttcgtccaacccaaatgggactttcccttactgttgatgtatcagct
cgggctttctatgaaccaattcttgtgacagagtttgttgcaaaatattttaatttcaat
ttttcaaggcaactgcctgatcaagatcgtctgaagattaaaaaagcactgagaggagtc
caaatagaggttactcatagggagtgtttcaaaagttacaaagtcagtggggtaacaaca
caaccaactaaccagttaacgtttactcttgatgacaagaaaacaaaaatgtcagttgct
caatatttttgtgacaaatataatattgagcttcagaatgtgaatctgcctgcccttcaa
gctgggtgtgattcaaaacctatttatttgccaatggagctctgtaagattgctactgga
cagagatactccaagagattaaatgacagacaagtaactaatctattaagagcaaactgt
caacggcctcaagaaagggaaaatagtatcaaggagatggttaggcgaaccaattttgat
ggcaattcgattgtaaataaggagtttggaattcaagtaagggatgaacattcattggtt
gatgctcgagttttgccatctccaatgcttttatatcataacacagggagcgaacaaacg
gaacaacctagaatggggcagtggaatatgataaacaagagaatgatcaacggcggtcga
gtggaattttggacatgtgtgaacttctctaggcaagtgaacagagatttagcatttgaa
ttttgtgaccaattgatcgatatgtgcaacagcaaaggaatggtttttaacccaaaccct
ttgcttcccatacgttcagcttattctattcaagttgacatgcctctcagggatattcac
aagcagtgtgtggcgaagtttaaagaaattggacaggcaggaaaacagcttcagctattg
ataattattttgcctgacatcatggggtcgtatgggaaaattaaacaagtctgtgaaaca
gaacttggaatcgtttctcagtgttgtcagcccaagcaagcatcaaagcttagtatgcag
tatcttgaaaatgtggccctcaaaatcaatgtgaaggttgggggacgtaacactgtgttg
aatgatgctattcaaagaaatattcctcttgtgactgatcgccctacaattatattgggt
gcggatgtgatacatccccagctaggagatttctcttctccttcaatagcagcggtagtg
gcttccatggattggcctgaggtcgccacgtacagaggaattttctctgcacaacctcat
cgtgaagaaattatcctagatctctataaatcatttcaggatcctcaaaggggcttagtt
catgaaggaatgcttagggaactacttattgcattcagaaaatcaactaatcataaaccc
cacaggattatattctacagagagggtgtcagtgaaggccaattcagtcaagttctgctt
tatgagattgacgcaataagaaagactttcttccaggcctgtctctcactagaggatgga
tatctaccgcctgttacttttgtggtggtgcagaaaagacatcatacacggctttttcct
gcagatcatagaaaccgtgaacagacacaccggagtggcaatattcttccaggtactgtc
gtcgataccaagatttgccatccaacgggatttgacttttacctcaacagccatgctgga
acgcagggaactagccggcctgcacactaccatgtgttgtatgatgagaacggattcagt
gcagattccttacagatgttgacaaacaatttatgttacacccatgcaaggtgcactcga
tcagtttccatagttcctcctgtgtattatgcccatttggcagccgttcgggcacgttat
tacattgagggcgaggcatcagacagcggctctacaagtgagagtgatcaggacagagtg
gagattcggccccttccactggtcaaggataatgtgaaagatgttatgttttattgctga
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