Alnus glutinosa (common alder): 133866227
Help
Entry
133866227 CDS
T10577
Name
(RefSeq) polygalacturonase At1g48100
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu00040
Pentose and glucuronate interconversions
aglu01100
Metabolic pathways
Module
aglu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
133866227
Enzymes [BR:
aglu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
133866227
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Pel9A-like_beta_helix
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
133866227
NCBI-ProteinID:
XP_062158751
LinkDB
All DBs
Position
1:complement(3380921..3384443)
Genome browser
AA seq
471 aa
AA seq
DB search
MKSSKNSSVLVFVFFVVIMIFVKFCLISVEARKNHIRKTKPRKGGNGGDTRGSNFTAPSP
APLPDYGSYPTSSTIFDVLSFGAKGDGVSDDSKALAAAWKAACKFPGATVEIPSESKFLI
KPITLQGPCMPHLVLQIDGTILAPTKVGLWPKSGLFQWINFKWVHNFTIQGTGTVDGQGS
DWWRNSQIHYIQKKSKHIPKTKPTALRFYSSYDVTVRDIKIINSPQCHLKFDSSGSVKVS
NITISSPEDSPNTDGIHLQNTQDVEIQHSNIGCGDDCVSIQTGCSNVHVHHINCGPGHGI
SLGGLGKHETVACVSDIVVENISVQNALSGVRIKTWQGGMGSVKNVSFTNVQVSDVKVPI
MIDQFYCDESLCRNKTRAVQISGVKYNQITGTYSERPIQLACSSDTPCTDIDLIDIQLKP
SPRCQRFQKGLCWNSYGKSRAPLVPSSIDYCLRSTTVKRVATSHPTNDVCF
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcagtaagaattcatctgttctcgtttttgtattctttgtggtcattatgatc
ttcgtcaaattctgcctaatctcagtcgaggcaagaaagaatcacattagaaagaccaaa
cctcgtaagggtggcaatggcggcgacactcgtggctcaaattttacagctccttcacca
gcccctcttcctgactatggttcttatcccacctcgtccaccatttttgatgttctgtct
tttggagctaagggtgacggagtctcagacgactctaaggcactggctgcagcatggaaa
gctgcgtgcaagttccctggggcgacggtagaaatcccatcagaatcgaagttccttatc
aagcccattactcttcagggcccttgtatgcctcacctcgtacttcagatcgacggaact
atcttagctcctacaaaagttggtttatggccgaaatccggtttgtttcagtggataaat
ttcaaatgggtccataactttaccattcaaggcactggtactgttgatggccaaggctcc
gactggtggcgtaactctcaaatccattatattcagaagaaatccaagcacattccaaaa
accaaaccaactgctttgagattctattccagctatgatgtcactgttcgcgacatcaaa
atcataaacagtccacagtgccacttaaaatttgacagttctgggagtgtgaaagttagc
aatattacgatttcttcgccggaggatagcccgaacacagacgggattcacctgcaaaac
acccaagacgtagaaattcagcattctaatattggttgtggggatgattgtgtatccata
caaactggttgctccaacgtccatgttcatcatattaattgcggccctggacatggtata
agtttaggaggattagggaagcacgaaactgttgcttgtgtctccgatatcgttgtcgag
aatatctcagttcaaaatgctctatcaggcgtaaggatcaagacatggcaggggggcatg
ggatccgtcaaaaacgtatcattcacaaacgttcaagtttccgacgtgaaggtcccgata
atgatagaccaattctattgcgacgagagtctctgccggaacaagacgagagcggtgcaa
atatctggtgttaaatataatcagataaccgggacgtattccgagcgaccaattcagctg
gcgtgtagcagtgacactccgtgcaccgacatcgatctaattgatattcagttgaagcca
tcgccgagatgtcaacgttttcagaagggcttgtgttggaactcttatgggaaatccaga
gctcccctggttccttcaagcatagactattgcttaagaagtacaacggtcaaaagagta
gcaacatcacatcccaccaatgatgtatgtttctga
DBGET
integrated database retrieval system
