KEGG   Alnus glutinosa (common alder): 133866388
Entry
133866388         CDS       T10577                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
aglu  Alnus glutinosa (common alder)
Pathway
aglu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aglu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133866388
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aglu03041]
    133866388
   03400 DNA repair and recombination proteins [BR:aglu03400]
    133866388
Spliceosome [BR:aglu03041]
 Complex B
  Other components
   Prp19 complex
    133866388
 Complex C
   Prp19-CDC5 complex
    133866388
DNA repair and recombination proteins [BR:aglu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    133866388
SSDB
Motif
Pfam: BCAS2 Arc_MA Plk4_PB2 Na_K-ATPase Sec10_N Frigida
Other DBs
NCBI-GeneID: 133866388
NCBI-ProteinID: XP_062158879
LinkDB
Position
4:complement(26690878..26704961)
AA seq 255 aa
MASHSTNGELLMLEAPPQPSGPTWPGLSSAEVIDALPYIDDDYSDSRVKEEVDRLVEDEM
RRSSKKPADFLKDLPPLPKFNFENHPMIAREYERVRAGKPPVALDRSRYNLEPPPMNKRN
DETAWKQTLQRAQCLLQYQMISLENLDLMVKYGPDLWKQFIQRFEAFLSRMQKLAHEQSE
KIEAVNRDRKYHQQNTAYELSALSIQWKELCEKNMEIQAACSKIENQIEELKKEATERGW
KLEVDFQNGTVLHSE
NT seq 768 nt   +upstreamnt  +downstreamnt
atggcgagccacagcaccaacggggaactgctaatgctcgaggctccgccgcagccctcg
ggcccgacgtggcccggattgtcgagcgcagaagtcatcgacgccttgccgtacatcgac
gacgactatagcgattccagagtcaaggaagaggtggaccgcttggtcgaggacgagatg
cgccggagctccaagaagcccgccgactttcttaaagacctgcctcctctgcccaagttc
aacttcgagaatcatccaatgattgctagagagtatgagcgtgtgagagctgggaagcct
ccagtggctcttgacaggtcacgatataatttagaaccaccaccaatgaataaaaggaac
gatgaaacagcttggaagcagacacttcagagagctcaatgcttactacagtatcaaatg
atcagtctggaaaatttggacctgatggtaaaatatggtccagatctctggaagcagttc
atccaacgatttgaagcattcctatcaagaatgcaaaaattagctcacgaacaatctgaa
aagatcgaagcagtgaaccgtgataggaaatatcatcagcaaaatactgcgtatgagctt
agtgctttgtccatacaatggaaggagctttgtgaaaaaaatatggaaattcaagctgca
tgtagtaaaattgaaaatcaaatagaagaactgaagaaagaagcaacagagagaggctgg
aaattggaagttgattttcagaatggtactgttttgcattcagaatga

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