Alnus glutinosa (common alder): 133866819
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Entry
133866819 CDS
T10577
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133866819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aglu03041
]
133866819
Spliceosome [BR:
aglu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
133866819
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
133866819
NCBI-ProteinID:
XP_062159457
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Position
1:complement(3959229..3964871)
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AA seq
485 aa
AA seq
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MATLADSFLADLDELSDNDADLLEEDDVDAGNMEEDVDGDMADIETLNYDDLDSVSKLQK
TQRYLDIMQKVDDALQKGSDISNHGMVLEDDPEYLLIVDCNALSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEEILNKTIDACDRALALDAAKKKVLDFVESRMGYIAPNLSTIVGSAVAAKLMGTAGGL
AALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYMEQTEIFQSTPPSLRMRACRLLAAK
STLAARVDSTRGDPSGNTGRNLREEVRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSIGQSKLAA
KVTKKFKEKNYGSSGASSGLTSSLAFTPVQGIELSNPQAHAHQLGSGTQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgctgattctttccttgcagaccttgatgaactatctgacaatgacgct
gatcttcttgaggaagatgatgttgatgctggaaatatggaggaagatgtcgatggggac
atggcggacatagaaactcttaactatgatgatcttgatagtgtttcaaaattgcagaaa
acccagagatatcttgatattatgcagaaggtggatgatgcactccagaaaggttctgat
atctcaaatcatgggatggttttggaagatgatcctgaatacttgctgattgtggactgt
aatgctttgtcagttgacattgagaatgaaattgttattatccacaattttattcgtgac
aagtaccggttgaaatttccagagcttgaatcacttgtgcatcacccaattgattatgct
cgtgttgttaagaagattgggaatgaaatggatttgacactggttgatctggaagggctt
ctaccatcggctattattatggttgtgtcagttacagcatcgactacaagtggcaagcca
cttcctgaagaaattcttaataagacaattgatgcatgtgatcgagctctcgctcttgat
gcagcaaagaaaaaggtccttgactttgtagaaagtagaatgggatatatcgcgccaaat
ctttctactattgttgggagtgctgttgcagctaaacttatggggactgctggtggtctt
gcagcgttagctaagatgcctgcttgtaatgttcagcttctaggtgcaaagaaaaagaac
cttgctgggttttctactgcaacatcacaatttcgtgtggggtatatggaacaaacagag
atatttcaatctacacctccatctttgaggatgcgtgcttgccggctcttggctgcaaag
tcaacacttgcagcaagagtagattccaccagaggagacccatcaggaaatactggaaga
aacttacgagaagaggtccgtaagaaaattgagaagtggcaagagccacctcctgcaaag
caacctaaaccacttccagtgcctgattctgagcctaaaaagaagagaggtggtcgtcga
ctgaggaagatgaaggaaagatatgcgataacagacatgaggaagctggctaataggatg
caatttggtgtacctgaagagagttctttaggggatggactgggagagggctatggaatg
ctcggtcaggctgggagcggcaagctgcgtgtatcaattggtcagagcaaacttgctgca
aaagttactaagaaatttaaggaaaagaattatggaagtagtggtgcttcctcaggattg
acttcaagtttagcatttacaccagtgcaggggatagagctctcaaatccacaggctcat
gcacaccagcttggcagtggaactcaaagcacgtacttctctgagacaggaacgttttca
aagatcaagcggacctga
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