Alnus glutinosa (common alder): 133866858
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Entry
133866858 CDS
T10577
Name
(RefSeq) plant-specific TFIIB-related protein PTF2-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aglu03021
]
133866858
Transcription machinery [BR:
aglu03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
133866858
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRF2-like_C_cyclin_rpt
TFIIB
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
133866858
NCBI-ProteinID:
XP_062159496
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Position
4:complement(7822712..7824625)
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AA seq
547 aa
AA seq
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MSSASRGCTSCRGDSFERDDITGHLVCLACGLIQEFDNYDAQLGGLNGPQGTSVRVGTAG
TGTVYTYKQRKVFGAQSLIDKLTCTLGLSDAKSGDIKTMVARITESEFGEGVWFPILIGA
CAYVVMRKDNKPLPIAEVASVIDSDIYELGRMVARVVDFLDLKGSVEFPEFDIVWSFERA
VRKSSTLSRVGRDKVETMRKQGIFLIQCAVKWFLTTGRRPMPVVAAVLVLVAELNGVDMR
IEDVAREVHANVTTSRLRYREFLESLVKVAQVLPWGEDVTVKNVVKSAPFVIEYMERKSM
EMPVDKKRKKVDGAIGVDLGDVVSECLRKDVEYVTDGYGEENIEVEQNGGIVRAGNDDND
LDRMKLSHECLSLMYKEFLNKMRNKKNSTEGSVDIRGKKRIGFKHLACTDWWNGKSDLTK
KLLLKQILEKDVGLDALPPSFVTGCRVYKRRREKINAAKVRINRVMHPSRTDLVESCDSC
SLESVHAKKKRNRRRVNDIDWEDFIIETLLLHEVKEEEIEKGHYNTLLDLHVFNGGVLPE
VLPWKAK
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgcctcacggggctgcaccagttgccgcggcgattccttcgagcgtgacgac
attacggggcatctggtgtgcttggcatgcgggctcatccaggagtttgacaactacgac
gcgcagctcggcggcctcaacggtccacagggcacctccgtccgcgtcggcaccgcaggt
acgggcactgtttacacttacaaacaaaggaaagtcttcggggcccaaagcctcatcgac
aaattgacctgtacgctaggcttgtccgatgccaaatcgggcgacattaaaaccatggtc
gccagaataaccgagagcgaattcggagagggtgtctggttcccaatcttgatcggtgct
tgcgcctatgtagttatgcgaaaagataacaagccgttgccgattgccgaggtggcctcg
gtcatcgactccgatatctacgagttaggtagaatggtggcgcgtgtggtggatttcttg
gatctgaaagggtcagtggagtttccggagttcgatatcgtatggtcattcgaacgggcg
gtgaggaaaagctcgaccctttctagggtggggagggataaggtggagacaatgaggaaa
caggggatttttttgatacagtgtgctgtgaagtggttcttgacgacgggacggaggcca
atgccggtggtggcggcagtgctggttctggtggcggagttgaatggggtggatatgagg
atcgaggatgtggcgcgggaggttcacgccaatgtcacgacgagtaggttgaggtatagg
gagtttttggagtcgctggtgaaggtggctcaggttttgccttggggggaagatgtcact
gtcaagaatgtggttaagagtgcgccatttgtgatcgagtatatggagaggaagtcaatg
gagatgcccgttgacaagaagaggaagaaagtagatggtgctattggggttgatttggga
gatgtggttagtgagtgtttgaggaaagatgttgagtacgtgactgatgggtatggtgag
gagaacattgaggttgaacagaatggtgggattgtgagagcgggaaatgatgataatgat
ttggataggatgaagctctcacatgaatgcttatctttgatgtacaaagaatttttgaat
aagatgcgtaacaaaaaaaattccacggaagggagtgttgacattcgtggaaagaagagg
ataggatttaagcatcttgcctgtacggattggtggaatgggaaatcagacctgaccaaa
aagctgttactcaagcaaatattggagaaagacgtaggattggatgctttgcccccatct
ttcgttactggttgtagggtttataagaggagaagagaaaagataaatgctgctaaagta
cggattaatagagttatgcatccatcaagaaccgatttggttgagagctgtgatagttgc
tctttggaatctgtacatgctaagaagaagagaaatagaaggcgagttaatgatattgat
tgggaagattttattattgaaactctcctcctccatgaagtgaaagaggaggaaattgag
aaggggcattacaataccttgctcgacttgcatgtgtttaacggtggagttttgccagag
gttctgccatggaaggcaaaatag
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