Alnus glutinosa (common alder): 133866948
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Entry
133866948 CDS
T10577
Name
(RefSeq) nuclear poly(A) polymerase 1 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133866948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133866948
Enzymes [BR:
aglu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
133866948
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
133866948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
133866948
NCBI-ProteinID:
XP_062159596
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All DBs
Position
4:complement(25718791..25723065)
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AA seq
542 aa
AA seq
DB search
MMGHRLGVTEPISLGGPTEYDVIETRELEKYLRDAGLYESQEEAVSREEVLGRLDQIVKI
WVKTISRAKGLNEQLVQEANAKIFTFGSYRLGVHDPGAHIDALCVGPRHASREEDFFGEL
HRMLSEMPEVTELQPVPDAHVPVMKFKFNGVSIDLLYAKLSLWVIPEDLDISQDSTLQNA
DEQTVHSLNGCRVTDQILRLVPNIQNFRTTLRCMRLWAKRRGVYSNVAGFLGGINWALLV
ARICQLYPNALPNMLMSRFFRVYTQWRWPNPVMLCAIEEGSLGLQVWDPRRNPQDRFHLM
PIITPAYPSMNSSYNVSSSTLLIMSKEFQRGSEICECLQAMEAYKVDWDTLFEPYPFFEA
YKNYLQIDITAENDDDLGKWKGWVESRLCQLTLKIERDTYNMLQCHPHPGDFSDRSRLFH
CCYFMGLQRKQGVPVNEGEQFDIRLAVEEFKGNVNMYTLWKPGMAIRVSHVKRRNIPNFV
FPGGIRPSRPSKGTWVSWSSELKVSGHAQDNSPEGKAVSNGGRKRKQVDDSLETNLLYKC
SI
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgatggggcatcggttaggcgttacagaaccgatttcgttgggtggaccgacagagtac
gatgtgatcgagacacgtgaactcgaaaagtatctgcgagacgcgggactgtatgagagc
caggaagaggctgtgagcagagaggaagtgctcggcagacttgaccagattgtaaagatt
tgggtcaaaacaattagccgtgctaaggggttgaatgagcaactcgtgcaagaagcgaac
gccaagattttcacctttggttcctatcggctaggggtgcatgaccctggtgcgcatata
gacgcgctttgtgtgggacctagacatgcttcaagagaagaagatttctttggcgagcta
cacagaatgctgtctgagatgcctgaagtaacagagttgcaacctgtgcctgatgctcat
gttccagttatgaaatttaagttcaatggtgtttccatagaccttctgtatgcaaaattg
tcactctgggttattcctgaagacctagatatttcacaggactcaacactacagaatgca
gatgagcagacagttcatagtctcaacggctgtagggtcactgaccaaattttgcgtttg
gttccaaatattcagaatttccgcacaactttgaggtgcatgaggctctgggctaaacgt
cgcggtgtttactcaaatgttgcagggtttcttggtggtataaactgggcattgctggtt
gcccgcatctgccagctatatcccaatgcgctgcccaatatgttaatgtctcgattcttc
agggtctatactcaatggcgttggccaaatccagtaatgctgtgtgccattgaagaagga
tctcttgggcttcaagtttgggatcctagaagaaatccacaagataggttccatttaatg
cctatcataactcctgcttacccgtccatgaactctagctacaatgtctcatcaagtact
ttgcttattatgtcaaaggagtttcaaagagggagtgagatttgtgagtgcttgcaggct
atggaggcatacaaggtggattgggatacgctttttgagccttatccattctttgaagcg
tataagaattatctacaaatagacattactgcagaaaatgatgatgatctaggaaaatgg
aaaggctgggttgaatctcgcctctgccagctaacattgaagattgagagagatacttat
aacatgcttcaatgccacccacacccgggggatttttcagacagatctcgacttttccat
tgctgttactttatgggtttgcagcgaaaacaaggagttccagtgaacgaaggtgaacag
tttgatataagattagccgttgaggaatttaaaggcaatgtcaacatgtacacattgtgg
aagcctgggatggcaatccgtgtatcccatgtaaaacgcaggaatataccaaactttgta
tttcctggagggattcgaccttcccgcccatccaaaggaacttgggtgagttggagttcc
gaactgaaagtttctggtcatgctcaagataattctcctgaaggtaaagcggtttcaaat
ggtggaaggaagagaaagcaggtggatgatagtctggagactaacctgctttacaagtgt
agcatatga
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