Alnus glutinosa (common alder): 133867645
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Entry
133867645 CDS
T10577
Name
(RefSeq) cullin-4
KO
K10609
cullin 4
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03420
Nucleotide excision repair
aglu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133867645
09124 Replication and repair
03420 Nucleotide excision repair
133867645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aglu04121
]
133867645
03400 DNA repair and recombination proteins [BR:
aglu03400
]
133867645
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aglu04147
]
133867645
Ubiquitin system [BR:
aglu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
133867645
DNA repair and recombination proteins [BR:
aglu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
133867645
TCR (transcription coupled repair) factors
Cul4-CSA complex
133867645
Exosome [BR:
aglu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133867645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
133867645
NCBI-ProteinID:
XP_062160379
LinkDB
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Position
5:complement(27089336..27115694)
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AA seq
820 aa
AA seq
DB search
MSLPTKRSATSDATTTSTSSPPPSSPHFPAMKKAKSQALALDPKNGLHHHQDNTAHSNNV
VVFDPSSMALEDDLKPDDSSPPARSVAANLARKKAQPPQPAKKLVIKLLKAKPTLPANFE
EDTWAKLKSAISAIFLKQPDPIDSEILYQAVNDLCLHKLGGNLYQRIEKECEAHISAALQ
SLVGQSPDLVVFLSLVERCWQDLCDQMLLIRGIALYLDRTYVKQTPSVRSLWDMGLQLFR
KHLSLSPEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALGIYSESFEKPFLECT
SEFYAAEGMKYMQQSDVTDYLKHVETRLHEEHERCLLYLDASTRKPLIATAEKKLLEHHI
YAILDKGFMMLMDGNRIEDLQRMHSLFLRVNALESLRQALSAYIRKTGQGIVMDEEKDKD
MVSSLLEFKASLDTIWEESFSKNDAFCNTIKDAFEHLINLRQNRPAELIAKFLDEKLRAG
NKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLK
TECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIELSVHVLTTGYWPTYPPM
DVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVL
MLFNDAEKLSFQDIKDSTGIEDKELRRTLQSLACGKVRVLQKMPKGRDVEDDDSFMFNDI
FAAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITEL
FQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccccaccaaacgctcagccaccagcgacgccaccactacctccacctcttct
cctcctccctcctctcctcacttccctgctatgaaaaaggccaagtcccaagccctcgct
ctcgaccccaaaaacggcctccaccaccaccaagacaacaccgcccacagcaacaacgtc
gtcgttttcgatccctcctccatggccctggaagacgatctcaagcctgatgactcctct
ccccctgctcgctccgtcgccgccaatttggcccggaagaaggcccagccgccccagccc
gccaagaagctcgttatcaagctccttaaagctaaaccaacactgcctgcaaattttgaa
gaggatacatgggcaaagctgaagtcagctatatctgctatatttttaaagcagccagat
cctattgactcagagatactttatcaggctgttaatgatctttgtctgcacaaattgggg
ggaaatctttatcaacggattgaaaaggagtgtgaagcacacatctctgcagcattgcaa
tccttggttggtcaaagcccagatttggtggtttttttatcacttgttgagagatgctgg
caggatctttgtgatcaaatgttgttgattcgtggtatagccttgtatctagatagaaca
tatgtgaagcaaacacctagcgtacgatcactgtgggacatgggattgcagcttttccgc
aaacatctttcattgtctccagaagttgagcacaaaactgtcactggccttttaagaatg
attgagagggaaagattaggtgaagcagtggatagaactcttcttaaccatcttttgaag
atgtttactgctctaggaatttactcagaaagctttgagaagccattccttgagtgcaca
tctgagttttatgctgctgaagggatgaaatacatgcagcaatcagatgttacagattat
ctgaagcatgtagagacaaggttgcacgaagagcatgaaagatgtttgctctaccttgac
gcaagtacaagaaagccactaatagcaactgcagaaaagaaactccttgaacaccatata
tatgccattcttgataaggggttcatgatgctaatggatgggaaccgtattgaggacctt
cagaggatgcattcactgtttttgagggtgaatgctcttgaatcactaaggcaagctctt
agcgcatacattcgcaaaactgggcaaggcattgtcatggatgaagaaaaagacaaagat
atggtctcgtcccttttagaatttaaggcttcgcttgacacaatatgggaagaaagcttt
tcaaagaatgatgcattttgcaacaccattaaggatgcatttgagcatctcatcaatctc
cgtcagaaccgacctgctgagctgattgcaaagtttctggatgagaagcttcgtgctggg
aataagggtacttctgaggaggaattggagggtacacttgataaagttctggttttattc
agatttatccagggcaaggatgtgtttgaagcattctacaagaaggatcttgcgaaaagg
ctgcttttgggaaagagtgcttctattgatgcggagaagtcgatgatctctaagctgaag
acagagtgtggcagccaatttacaaacaaacttgaggggatgttcaaagacattgaatta
tcaaaagagataaatgaatccttcaaacaatcatcccaggccaggacaaaactcccatca
gggattgagttgagtgtgcatgttttaacaacagggtactggccaacatatccacccatg
gatgtcagacttcctcatgaattgaatgtctaccaggacattttcaaggagttctacttg
agcaagtacagtgggaggcgcttaatgtggcaaaattcattaggccactgtgtgttaaaa
gccgaatttcctaaaggtaaaaaggagctggccgtttcactatttcagactgttgtgttg
atgctctttaatgatgctgagaagctaagttttcaagatattaaggactcaaccggaatt
gaggataaggaactgaggaggactctgcagtctcttgcatgtgggaaagttcgagtccta
caaaagatgccaaagggtagagatgtggaggatgatgattcatttatgttcaatgacata
tttgcggctccgctttaccgtataaaggtaaatgcaatccaaatgaaggaaacggtggag
gagaatacaagcaccaccgaaagagtatttcaggaccgtcaatatcaggttgatgctgct
atcgttcgaataatgaagactagaaaagtgctgagccacacgcttctgataaccgaactc
ttccaacagctaaagtttccaataaagccagctgatttgaagaaaaggattgaaagcctc
attgacagggagtatctggagcgtgacaaaaacaacccacagatatacaattacttggcg
tga
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