Alnus glutinosa (common alder): 133868413
Help
Entry
133868413 CDS
T10577
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1-like isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aglu04812
]
133868413
Cytoskeleton proteins [BR:
aglu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
133868413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Katanin_con80
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
Beta-prop_EML
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_EIPR1
eIF2A
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
WD_LRWD1
PRCH
Motif
Other DBs
NCBI-GeneID:
133868413
NCBI-ProteinID:
XP_062161284
LinkDB
All DBs
Position
5:complement(6716701..6727313)
Genome browser
AA seq
841 aa
AA seq
DB search
MAKRGYKLQEFVAHSASVNCLNIGKKACRLFITGGDDHKVNLWTIGKPNSLMSLCGHTSP
VESVAFDSAEVLVLAGASNGAIKLWDLEEIKMVRTLTGHRSNCSAVEFHPFGEFFASGAM
DTNLKIWDIRKKGCIHTYKGHTRGVSTIKFSPDGRWVVSGGFDNVVKVWDLTAGKLLHDF
KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRAITFHPDGRT
LFSGVEDSLKVYSWEPVICHDAVDMGWSTLGDLCIHDEKLLACTYYQNSIGVWAADISLI
EPYGANSTHDQNDCTEQKTNLNSQGSQSSEKVGSGIRSTLDLRRMSPDYETKEIKNIYVD
STGGKPVASQRVESDCPKKEPASESKEISCLPTQKQSPAIGLNARSKEKALDKSFVVPSI
VPRDSPDGKDGPNSRKECITFSRTKRGMLLKPAHTRRPSNSKIEVERQPEVVESETLSNV
TSKLDGAICLNFQSKLASEDGSRESYEEKHSNIKGVAENFEKNLSPQTPSNQESCDKSLN
CSSGDKSLNCSKGISPVKIVNGVAVIHGRTRSLVERFERRERFNSNEDQASTMSHVVPET
DKKDQASTMSHVIPETDKKDQASTMSHVIPETDKKDQASTMSRVIPEMDKTPTMPKGEPQ
TSGRDSASANYRDVTEDLMQTHEVFLSTLRSRLTKLQVVRHFWERNDTKGAISALRKLPD
HSVQADVISVLTEKTEILTLDLFSCMLPVLLGLLDSKVERHASVSLEMLLKLVAVFGPVI
SSTISAPRAVGVNLQAEKRLECCNQCFIQMQKIQKVLPALVRKGGLLARCAQELNLVLQE
S
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcgtggatataagctacaggaatttgtggctcattcggcgagtgtgaactgc
ctgaacattgggaagaaagcctgccgtctttttattaccggcggggatgaccataaagtt
aatctgtggacgattgggaaacccaattctttaatgagcctgtgtggccacacaagtcca
gttgaatctgtagcttttgattcggcagaagttttggtgcttgctggagcttcaaatggt
gcgataaagctttgggatttggaggaaataaagatggttcgaactctcactggacacaga
tccaactgcagtgctgttgaatttcatccatttggagagttctttgcgtctggtgccatg
gatactaatttaaagatctgggatattagaaagaaaggatgcattcacacatacaagggc
catactcgaggcgttagtacaatcaagttcagtcctgatggtcgatgggtagtttctggt
ggatttgataatgttgtaaaggtttgggatctaacggctggaaagctcttgcatgatttt
aagttccatgaaggacacattcgatccatagatttccatccccttgagtttctcctggcc
acaggttcagcagacagaactgtgaaattctgggatctggaaacctttgaactgattgga
tctaccagacctgaggctactggagtacgcgcaatcacctttcatcctgatgggaggacc
ctgttttctggagtggaagatagtttgaaggtttactcgtgggagcctgtaatttgtcat
gatgctgttgatatgggatggtcgacacttggtgacctatgcattcatgatgaaaaactt
ctggcttgcacatactatcaaaattctattggagtttgggcagcagatatttcgcttatt
gagccatatggagctaattcaacacatgaccaaaatgactgtacagagcagaaaactaat
cttaattcccagggaagtcagtcttcagagaaagtaggaagtggtatcaggtcaactttg
gatttgcggcgtatgtctcctgattatgagacaaaagagataaagaacatatacgtggat
tctactggcggaaagccagttgcttcgcagagagttgagtccgattgtcccaaaaaggaa
cctgcatcagaatctaaggaaatcagttgtctgccaactcagaagcaaagtcctgcaata
gggttaaatgcaagatctaaagaaaaagcacttgataaatcctttgttgtgcctagcatt
gtacctagggacagtcctgatggaaaagatgggcccaattcaagaaaagaatgtataacc
ttttcaaggacaaaacgtggtatgttgctcaaaccagctcatacacggaggccatcaaat
agcaaaattgaggttgagaggcagccagaagttgttgaatctgaaactttgagcaatgtg
acgagcaaattagatggtgcaatatgtttgaacttccagtccaaacttgcatcagaagat
ggatctagagaatcgtacgaggaaaaacattctaatatcaagggtgttgctgagaatttt
gaaaaaaatttgtcaccacagacgccctctaatcaggagagctgcgataaatccctcaat
tgcagctcaggcgataaatccctcaattgcagcaaagggataagccctgttaaaattgtt
aatggagttgctgttatacatggaaggacccgctctctcgttgagaggtttgaaagaaga
gaaagattcaatagcaatgaagatcaagcatctaccatgtctcatgtggtacctgaaacg
gataaaaaagatcaagcatctaccatgtctcatgtgatacctgaaaccgataaaaaagat
caagcatctaccatgtctcatgtgatacctgaaacagataaaaaagatcaagcatctacc
atgtctcgtgtgatacctgaaatggataaaactcccaccatgccgaaaggagaacctcaa
acttctggaagggactcagcttctgcaaattatagggatgttactgaagatctcatgcaa
actcatgaagtattcctaagtacccttcggtcccgcttaacaaagttacaggtagtgcgg
catttttgggagcggaatgatactaaaggtgctatcagcgcgttgaggaagctaccagat
cattctgtgcaagcagatgtgatcagtgtacttacggagaaaacggagattctcacctta
gatctgttctcctgcatgcttcctgtgcttctgggcttgctggatagcaaggtagaaagg
catgcaagtgtgtcattggagatgctattgaagcttgttgcagtctttggcccagtgata
agctcaaccatctcagcacctcgtgctgttggcgtcaatcttcaggcagaaaaaaggcta
gaatgctgcaaccagtgttttattcagatgcaaaagatccagaaagttcttccagcactt
gtaaggaagggtggtttgctggcaagatgtgcgcaggagttgaatctagttcttcaagaa
tcataa
DBGET
integrated database retrieval system
