Alnus glutinosa (common alder): 133868452
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Entry
133868452 CDS
T10577
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133868452
mRNA degradation factors
5'-3' decay
Decapping complex
133868452
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133868452
NCBI-ProteinID:
XP_062161335
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Position
5:complement(168498..179372)
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AA seq
1382 aa
AA seq
DB search
MAFPGNPNLQNQNQQQQGALIDVPKLFKPSPNPPPLGNLNSSPSFPTPSTIPSLSPPFPM
PSSSYPPPTGPSYSFHPTFLPHPPSPLDHYQPQHPHQHQLLPASARLMALLTTQNPPSPQ
PHMLFSSPSSLPSSSSTSTSATSTTPSAPPPTRLLSTKLPKGRHLIGHRVLYDIDVRLQG
EAQPQLEVTPITKYASDPDLVLGRQIAVNRSYICYGLKMGNIRVLNINTALRSLLRGHTQ
RVTDMAFFAEDVHLLASASVDGRVFIWKINEGPDEEDKPQITGKIGLAIQIEGMGESIQP
RVCWHPHKQEILMVAIGNRILRIDTTKVGKGEVFLAEEPLKCHIDNLIDGVQLVGKHDRD
VTELSMCQWMTSRLASASMDGMVKIWEDRKALPLAVLKPHDGHPVNSVTFLTAPHHPNHI
VLITAGPLNREMKIWASAREEGWLLPSDAESWQCTQTLDIKSSSEPKIEDAFFNQVVALP
RAGLFLLANAKKNAIYAIHLDYGPNPAATRMDYIAEFTVTMPILSLTGTSDNLPDGEHIV
QVYCVQTQAIQQYALDLSQCLPPPLDNMESEKSDSNISRAFDASDSSATCEPPQGSKPTE
MPVVNAPPIPSILSSSSEIATVVNCHVASSEATTLQEATISRVETMPGDLPSHSGAENFH
TALPPLPLSRRLTRKLSSLRSPLNSYETNTPLTDHGSDQPALEYSSDRRMDSAKDNKTDV
PPSGDNLWKGDKNAAQSDISMVPNPPIIFKQPTHLVTPSELLSRVCSSSENSQISQGGNV
VETKVQDVVVNNDAENIEVEVKVIGEKGTSLNNEGDRQRDSHIMVAEKKEKSFYSQASDL
NIQMARDCCVGTYNVERLCQTNDVSVTRAPNQPPDTCVEEVQDMMNDMPPKVGESETLMP
VLQSPAPAPKGKRHKGKNSQVSGPSSPSPSPFNSIDSSNEPCSNSGAPYMETALPQLSAM
QEILEQLMSTQKEIQKQMNVIVSASVTKEGKRLEGSLGRSMEKVVKANTDALWAHFLEEN
AKQEKLEQDHMQQITNLITNYMNKDLPAMLEKNLKKEIALVGPAVARAITPVVEKTTSSA
IMESFQKGVGEKAVNQLEKVVTSKLEGAVTRQIHSQFQTSGKQALQDALRSSLEASTVPA
FEMSCKAMFEQVDVTFQKGLSEHTTAVQQHFESTHSSLAIALRDTINSASAITQTLSREW
AEGQRKLLAIAAASANSTAVNPLVTQLSNGPLVGLHEMAEAPLDPTKELSRLIAEQKFEE
AFIGALHRRDVSIVSWLCSQVDLPRILSTVPLPLSQGVLLALLQQLAYDTGNETPRKLAW
MTDVAVAINPADPTIAVHVHPIFEQVYQILGHQRNLPTTPASEASSIRLLMHVINSVLMS
CK
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atggctttccccggaaacccaaatctgcaaaaccaaaatcaacagcagcaaggagcacta
attgatgtgccaaagctgttcaaaccttcacccaatcctcctcctcttggcaatctgaat
tcctccccctccttccctactcccagtactattccttctttatctcctccctttcccatg
ccttcatcttcttatcctccccccacaggcccttcttattcattccaccccaccttcctc
ccccatccaccatccccacttgaccattaccagcctcagcacccgcaccagcaccagctt
cttcccgccagtgcacgtttgatggcactcttgaccacccagaaccccccctccccacag
ccccatatgctcttctcttcaccatcttcattgccatcatcatcttccacttccacttcc
gccacttcaaccaccccctccgcgcctcctcccaccaggctgctcagtaccaagctcccc
aagggacgccatttgatcggccaccgcgttctttacgacatcgatgttcgcttgcaaggt
gaggcgcagccccagcttgaggtcactcccatcaccaagtacgcctccgatcccgacctc
gttcttggccgtcagattgccgttaatagatcttacatatgctatggcctcaagatgggt
aatatccgcgttcttaacattaacactgccttaagatctttgcttcgtggccacacccag
agagtaaccgatatggctttcttcgctgaggatgttcaccttttggctagtgctagtgtt
gatggacgggttttcatatggaagatcaatgagggtccagatgaggaagacaaacctcaa
attacaggcaaaattggtcttgccattcagatagaaggaatgggggaatcaatccaacca
cgagtgtgttggcatcctcacaagcaagaaattttgatggttgcaattggaaaccgtatc
cttagaattgacaccacaaaagttggaaagggcgaagtatttttggcagaggaacctctt
aaatgccacattgataatctaattgatggggtccaattggttggtaaacatgatcgtgat
gttactgaattgtcaatgtgccaatggatgaccagccgtttagcttcagcatcgatggat
ggcatggtgaagatttgggaagaccgtaaggcattaccgcttgcagtattgaaaccacat
gatggccatcctgttaattctgtgacattcttgactgcccctcaccatcccaatcacatt
gttcttatcactgcggggccacttaatcgggaaatgaaaatatgggcctctgcaagggag
gaaggttggctgttgccgagtgatgctgaatcatggcagtgtactcagactttagatata
aagagttcttctgaacccaagatcgaggatgcattctttaatcaagttgtagccttgccc
cgtgcaggcctatttctacttgcaaatgccaagaagaatgctatatatgccatacaccta
gactatggacctaatccagcagctactcgcatggattacattgctgagtttacagtcaca
atgcctattttgagtttgactggaactagtgacaatttaccagatggagaacatattgta
caggtctattgtgtccaaacacaagccattcagcaatatgcgctggacctatctcagtgc
ctgccaccacccctggacaacatggagtcagagaaatcagactccaatatttctcgtgct
tttgatgcttctgatagttctgctacttgtgaaccacctcagggaagtaaacccactgag
atgcctgtagttaatgcacctcctataccatctattctttcgagcagctctgaaattgcc
accgtagtcaactgtcatgtggcttcttctgaggctactaccttgcaggaagctacaatc
tctcgtgtggaaacaatgccaggtgatttgccttctcacagtggcgctgaaaattttcac
acggcattgcctccacttcctttgagtcgaagattaactcgcaaattatctagtcttaga
agtccattaaatagctatgagactaatacacctctcactgaccatggtagtgaccagccg
gctcttgaatattcgtctgaccggagaatggactctgcaaaagataacaagactgacgtg
cctccatcgggtgacaatttgtggaagggtgacaaaaatgctgcacaaagtgatatttct
atggttcccaatcctcctataatatttaaacagccaacgcatctggtaactccatcagag
ttattgtctagagtttgttcatcatctgagaattcacaaattagtcagggtgggaatgtg
gtagagacgaaggttcaagatgtggttgtcaacaatgatgcagaaaacattgaagtagag
gttaaagttattggtgagaagggaaccagtctaaataatgagggtgaccgtcagagagat
tcccatataatggttgcggagaaaaaggaaaaatccttctattcccaggcctcagatctt
aacattcagatggccagagattgttgtgtgggaacttataatgtggagagactatgtcaa
actaatgatgttagtgttactagggcaccaaaccaacctcctgacacttgtgtggaagaa
gttcaagatatgatgaatgatatgcctccaaaggttggtgaatcagaaactctcatgcca
gttttgcagtctcctgccccagctccgaagggaaaaagacacaaggggaaaaattctcaa
gtgtctggtccatcttccccttccccaagtccttttaactccatagattcatcaaatgaa
ccatgtagcaattcaggtgccccatatatggaaactgctttgccccagttgtcggctatg
caggagatacttgaacagttaatgagcacgcaaaaagaaattcagaagcagatgaatgtg
atcgtttctgcctcagttaccaaagaaggtaaaagactagagggatccttgggccgaagc
atggagaaagttgtcaaggctaacactgatgctttgtgggctcatttcctagaggaaaat
gcaaagcaggagaagttagaacaagaccatatgcagcagataacaaacttgatcacaaat
tatatgaacaaggacttgccagccatgctcgagaaaaatttaaagaaggaaatagctttg
gttggaccagctgtagctcgtgcaattactccggttgtggagaaaaccacatcatcagct
attatggagtcattccagaaaggagtgggagaaaaggcagtcaaccaactagagaaagtg
gttacttcaaaactcgaaggcgcagtgactaggcaaattcattcacagtttcaaacttct
gggaagcaagctcttcaggatgcattaaggtctagtttggaagcttcaactgttcctgca
tttgagatgtcatgcaaagctatgtttgagcaagttgatgtcacattccagaaagggctg
agcgaacatacaactgctgttcagcagcattttgaatctacacattcttcactggccatt
gctttaagggacacaattaattcagcatcagcaatcactcaaaccttgagcagagaatgg
gctgagggccaacgtaagctgttagcaattgcagctgcaagtgctaactcaacagcagta
aatcccttggtaacacagttgagcaatggaccattggttggtcttcacgagatggctgag
gcaccattggatccaactaaagaactatctagattgatagctgaacaaaaatttgaggaa
gcattcattggagccctgcacagaagggatgtctcaatagtttcatggctatgttctcag
gttgatttaccgaggattttgtcaacggtgccacttcctctgagccaaggagttctgctg
gctcttcttcagcaactggcttatgatactggcaacgaaacacccagaaagctggcatgg
atgacggatgtggctgttgccataaacccagcagatccaactattgccgtgcatgtgcat
cccatctttgagcaggtatatcagatacttggccatcaacggaacctaccaactacccct
gcttcagaagcaagcagtatccgccttcttatgcatgtcataaactctgtgttaatgagc
tgtaaatga
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