Alnus glutinosa (common alder): 133868479
Help
Entry
133868479 CDS
T10577
Name
(RefSeq) protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aglu03021
]
133868479
Transcription machinery [BR:
aglu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
133868479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
133868479
NCBI-ProteinID:
XP_062161364
LinkDB
All DBs
Position
5:complement(7570789..7574794)
Genome browser
AA seq
656 aa
AA seq
DB search
MADLENLLLEAAGRTSSAGRNRNSLPSSRRRREGSYSDGGSDSRDDDSDDDRGYASRKPS
GSQVPLKKRLDPTERDDDLGSQEEGDGGVSDREGDTSDESDVGDDLYKNEDDRRKLAQMT
ELEREMILSDRASKKIDKNLREKIRSKRESGKTTQSRKETPPLPPSRMRLSARSADRSAA
KDDALNELRAKRLKQQDPEAHRKLRDASRGSSGGRTFSPKRKSFSRASLSSSSQSESESR
SHSEDDGSTGDAAMIDSDDERGMLGSDVPSFEDIKEITIRRSKLAKWFMEPFFEELIVGC
FVRVGIGRSKSGPIYRLCMVRNVDATEPERQYKLENKTTYKYLNVVWGNESSAARWQMAM
VSDSGPQEEEYKQWVKEVERSGGRMPIKHDVLEKKEAIKKTNSYVYSAATVKQMLQEKKS
ASSRPLNVAAEKDRLRRELDIAQSKHDEAEVERIKIRLQQLEASRQTQDKDSKAIRLAEM
NRKNRVENFKNASEMKRVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGGVAPVANGDAIG
ASATAISNGAGDKVTAEFGMEATAAALEAAADAGKLVDTSAPVDQGTVSNILHNFELPIS
LAALHRFGGPQGAQAGFMARKQRIEATVGCKVPENDGRRHALTLTVSDYKRRRGLL
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcagacctagaaaatttgctcctggaggctgcaggaagaaccagttcagcaggcaga
aaccggaactcacttccatcatctagaaggcgacgtgaaggttcatattctgatggtgga
agtgactctagggatgatgactcagatgatgatcgtggttatgctagcagaaagccttct
ggatcccaagttcctttgaaaaagaggttggacccgactgaaagagatgatgatctgggc
agccaagaagaaggtgatggtggtgtttctgatcgtgagggtgacaccagtgatgaatct
gatgttggggatgatctttacaagaatgaagatgacaggcgaaagcttgcacagatgact
gaacttgaaagagagatgatcttgtcagatagagcatccaagaaaattgataagaatttg
agggagaaaataagatccaagcgggagagtggaaagacgacccaatctcgaaaagagact
ccacctcttccaccatctcgtatgcgcttgtcagctagatctgctgatcggtcagctgca
aaggatgacgcattgaatgaattgcgagcaaaacggttgaagcagcaggaccctgaggct
caccggaagttgagagatgcatctagaggaagttcagggggtcgaactttttctccgaag
cgaaaatccttcagtagagcaagtctgagtagctccagtcagagcgagagtgaaagtagg
tcccacagtgaagatgatggttcaacaggagatgctgcaatgattgacagtgatgacgag
agaggcatgctgggatctgatgtgccatcttttgaagatataaaggaaattactatcagg
aggtcaaaacttgcaaaatggtttatggagccattctttgaggagttgatagtgggttgc
tttgttagggtaggaattgggaggtcaaagtctgggcctatatataggctctgcatggtt
cggaatgttgatgccacagaacctgagcggcagtacaaactagagaataaaaccacatat
aagtatctaaatgttgtttggggcaatgaaagctctgctgctaggtggcagatggctatg
gtttctgactctggaccacaggaggaagagtataaacagtgggttaaggaggtagaacga
agcggtggccggatgccaatcaaacatgatgtgttggaaaagaaggaggccattaaaaaa
accaactcatatgtttactcagcagccactgtgaagcagatgttacaagagaaaaagtct
gcttcatctagaccattgaacgttgcagctgagaaggaccggttgaggagggagttggat
attgcacaaagcaagcacgatgaggctgaggtggagaggatcaagataagattgcagcaa
ttagaggcctccaggcaaacgcaggataaagattccaaggctattaggctggctgagatg
aacagaaagaaccgggttgagaatttcaaaaatgcatcggaaatgaaacgggtaaacaca
tctttgaaagcgggggaggctggctatgatcccttttcaaggagatggactaggtcaagg
aattactacgtttcaaagcccggtggagtagccccagtggcaaacggtgatgctattggg
gcatctgccactgcaatcagtaatggggctggagataaggtaaccgcagaatttggcatg
gaagctacagccgcagccttggaagctgcagctgatgcggggaagttggttgatactagt
gctcctgtggatcaagggactgtatcaaatattctgcataattttgagctgccgatttca
ttggcggcacttcatagatttggtgggccccagggagctcaggctggatttatggccagg
aaacagaggatagaagcaacggttggatgcaaagtcccggagaatgacggtaggaggcac
gccctgaccctgacagttagtgactataagagaagaagagggcttctctga
DBGET
integrated database retrieval system
