KEGG   Alnus glutinosa (common alder): 133869486
Entry
133869486         CDS       T10577                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
aglu  Alnus glutinosa (common alder)
Pathway
aglu03020  RNA polymerase
aglu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aglu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    133869486
  09124 Replication and repair
   03420 Nucleotide excision repair
    133869486
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aglu03021]
    133869486
   03400 DNA repair and recombination proteins [BR:aglu03400]
    133869486
Transcription machinery [BR:aglu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     133869486
DNA repair and recombination proteins [BR:aglu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      133869486
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 133869486
NCBI-ProteinID: XP_062162495
LinkDB
Position
5:complement(263980..267151)
AA seq 247 aa
MEKGGKGFSLPPQTARKSSLKSNPPKQGVSSLKGKDDSSTKSKRGRKVQFNFEGSPEAKT
NFSPKSGAKFETLFPKGDSSKWGKGDKTSTGGKSSIPKEPQPLEFKIEQELPENVKCMMD
CEAVDILQGIKDQMVILSRDPEFRLPVSFDKGLQYAKRGGYYTNPQPVRQVLEALTKYDV
SDGEICLIANVCPESVDEVFALVPSLKAKRTKLSEPLKDVLSELAKLKESPSLESQMERA
RVDIPDN
NT seq 744 nt   +upstreamnt  +downstreamnt
atggagaaaggaggaaaaggtttctctctgcccccccaaacagcacgaaaatcttcactc
aaatctaatcctccaaaacaaggtgtatcatccttgaaagggaaggatgatagctcaaca
aagtcaaagaggggaaggaaagttcagttcaattttgaaggttcacccgaagctaaaact
aatttttctccaaaatctggtgcgaagtttgaaactctatttccaaaaggtgattcgagc
aaatggggaaaaggagacaagacttctactggtggaaaaagttcaattcctaaggaacca
caaccactggagttcaaaattgagcaggaactcccagagaatgtcaaatgcatgatggat
tgtgaggctgttgatattttacaaggaatcaaggatcagatggtcatattatcaagagat
ccagaatttagactccctgtatcatttgacaaagggctgcagtacgccaaaaggggtggt
tattacacaaatccccagcctgttagacaagttcttgaggctctcacaaaatatgatgtc
tctgatggcgagatatgcctgattgccaatgtttgtccagaatctgttgatgaagttttt
gctctggtcccatccttgaaggctaagagaaccaagctcagcgaacccctcaaagatgtg
ctaagtgagcttgctaagttaaaagagtctcctagcttagaaagtcaaatggaaagggca
cgagttgacatccctgataattaa

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