Alnus glutinosa (common alder): 133869493
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Entry
133869493 CDS
T10577
Name
(RefSeq) probable small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133869493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133869493
03041 Spliceosome [BR:
aglu03041
]
133869493
03032 DNA replication proteins [BR:
aglu03032
]
133869493
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
133869493
Spliceosome [BR:
aglu03041
]
Complex A
U1 snRNP components
Sm proteins
133869493
U2 snRNP components
133869493
Complex B
U1 snRNP components
133869493
U4/U6.U5 tri-snRNP components
133869493
Complex C
U2 snRNP components
133869493
DNA replication proteins [BR:
aglu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
133869493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF6454
Motif
Other DBs
NCBI-GeneID:
133869493
NCBI-ProteinID:
XP_062162502
LinkDB
All DBs
Position
5:32907625..32913078
Genome browser
AA seq
87 aa
AA seq
DB search
MSIPVNPKPFLNNLTGKPVIVRLKWGMEYKGFLASVDSYMNLQLANTEEYIDGQFTGNLG
EILIRCNNVMYLRGVPEDEEIEDAERD
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcccagttaacccaaaacctttcttgaacaatttgaccgggaagcctgtcatt
gtgagactcaagtggggaatggagtacaaaggttttcttgcctcagtggattcatacatg
aacttgcagctggctaacactgaagaatacattgatgggcaattcactggaaatctggga
gagattttgatcagatgcaacaatgtaatgtatcttcgcggggttccggaggacgaagaa
attgaagatgctgagcgagactag
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integrated database retrieval system
