Alnus glutinosa (common alder): 133870145
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Entry
133870145 CDS
T10577
Name
(RefSeq) ATP-dependent DNA helicase SRS2-like protein At4g25120
Organism
aglu Alnus glutinosa (common alder)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_30
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-GeneID:
133870145
NCBI-ProteinID:
XP_062163187
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Position
6:22739825..22780666
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AA seq
1159 aa
AA seq
DB search
MSKENAHAMVPQISRGEITDEQKARISLNFRAAKALLARKRPRLEASPHHQFPPHKIVDA
NGIATPVTSIKRVPLAEVPTNTPSPSFVMGVKSTGCENRSSSCSGGVTINRMELTDHSSR
ASRIGVPLENDHLLDSFKTPLKQPECSTLIDSVSMPSILDDDFDESILEEIDVFCDQKSA
EKAEREVPSGEIFVGSQHTNNSSSILSTTLEPATGYEDVRSQGTLDSGSHLDTRANGSGT
SQTVQTGNMPEEYLKYLQSLNDRQREASCYDISVPLMIVAGPGSGKTSTMVGRVFMLLNE
GISPSNILAMTFTTAAASEMRDRIGAVAGKATAKELTISTFHSFSLQLCRSHAEKLGRTS
EFLIYGQGQQRKATIEAVRLLENEKSIQNHNACILGEGSNGLTSLQHLKDKSRKWLKFVT
KAKASGRTPEECRKMGDDIGAAILGNYNDILKSCNALDYHDLISCSVKLLTDFPEVFKEC
KDLWKAIVIDEFQDTSSMQYNLLRILASHNHITIVGDDDQSIFSFNGADISGFDSFRKDF
PNYKEIRLNKNYRSTRCIVEAASSLIQNNKNRCQLKDVITDNSSGSKITIKECHNEDAQC
AFVVDKILETASNGSAASCSFGNIAILYRRQVSGKVFQMTFRERKVPFNIHGVAFYRKKV
VRAIVAMLRTTLPACDDAQYRQVFKALLPFEKEEKKRVIDHIDKISTVRKCSFISAASDI
FSAKVSGTFKRSQLTQGRKVLSTLEIVSKLVHREQSISAVITSVANMVPQKYLLEQRAII
DVDGGKLLNEDNDIRSVLQYLLDDVSEFLSTKFLAVEGASKIIVEEKGCVNVLKAFIDFI
SERERENFRSRRHNNENSVTLTTIHQSKGLEWDVVFIVKANESEIPLLHEFNGVAKENGT
SIEEERRLLYVAMTRARKRLFILYVMMDSNWQMLQPSRFLKEIPDHLREVQAELSIQDLQ
TKQEHIPNETMQFSVDLPREKELSEVDMVPDEFLNTCNYKASEEWKEPVEASNGNSFLRR
FSVEDRLVISHLFHKWAKKQAFQNPKRLLDKVGFVIDERLRAKKNKHKDVLSALKSCLSC
DEAFQYAEYVLRWEKIPADKRAHFMREKQEHFQKLRIENSMGSSEPTCKQISFLQSLGCT
VTPSSRLHASRLIEQYKSL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaggaaaatgcgcatgcaatggtgcctcaaatttctagaggagaaatcacagat
gaacaaaaggctcgaatttctctgaacttcagagccgcaaaggcactacttgctcgcaaa
cggcctcgcctcgaagcatcccctcatcatcaatttcctcctcacaaaattgtggatgca
aatggaattgcaaccccggttactagcatcaagagggttcctcttgcagaggtaccgaca
aacacgccatccccatcttttgtgatgggggtcaagtcaacaggttgtgaaaataggagc
agttcctgttctgggggcgtaactatcaatcggatggaattaactgatcatagttctaga
gcaagcaggattggtgttcctttagagaatgaccacttgttagattcttttaaaactcct
ctgaaacaaccagaatgttctactttaattgattccgtttcgatgcctagcattctagat
gatgattttgatgagtccattttagaagaaatagatgtcttctgtgaccagaaatctgca
gaaaaagcagagagggaggttcctagtggtgaaatttttgtgggtagtcagcatactaat
aatagtagtagtatactcagcaccactttggagcctgccacagggtacgaggatgtgaga
agtcaaggcacattggattctggaagtcatttagacactcgagcaaacgggtcaggtact
tctcagaccgtacagactgggaacatgcctgaggagtacctgaaatatttgcagtctctg
aatgacaggcaaagagaagcatcttgttatgatatttcagtccctttgatgattgttgct
ggtcctggaagtggaaagacttccacaatggttgggcgtgtgtttatgctgcttaatgag
ggtattagtccgtcaaacattctggcgatgacttttactacagcagcagcttctgagatg
agagatcgcattggtgcagtggctggaaaggcaactgctaaggagctcacaatcagcacg
ttccattcattttccttgcaactttgtcgttcacatgcagagaagttagggcgcacatca
gaattcctaatatatggacaagggcaacagagaaaagcaactattgaggctgtgcggtta
ttagaaaatgagaaaagtatacaaaatcataatgcctgcatacttggtgaagggtctaat
ggtctaacgtctctgcaacatcttaaggataagtcaaggaaatggctgaagtttgtgacc
aaggctaaagcttctggtaggactcctgaagaatgccgtaaaatgggtgatgacatcgga
gctgcaattctcgggaactacaatgacattttaaagtcttgtaatgctctggattaccat
gacctcatcagctgttctgtaaagctgcttactgattttcctgaagtattcaaggagtgc
aaggatttatggaaagccattgtaatagatgagtttcaagacacaagttccatgcaatac
aatcttctgcggattcttgcatctcataaccacataactattgttggtgatgacgatcag
tccatttttagttttaatggagctgacatttctggatttgattcgtttcgcaaagatttt
ccgaactacaaagagatcagacttaataaaaactatcgatccacacgctgtattgtggag
gctgcatcttctcttatacaaaataataaaaaccgatgccagttaaaagatgttatcact
gataattcttctggatctaagataactattaaagaatgtcacaatgaggatgcacagtgt
gcatttgttgttgacaagatcttggaaactgcttctaatggttctgctgcgagctgctcc
tttggcaacattgcaattctttaccggaggcaggtatcaggaaaagtcttccaaatgact
ttccgtgaaagaaaagtaccttttaacattcatggtgtagcattctatcggaaaaaggtt
gttagagccattgttgctatgcttagaacaacattgcccgcttgtgatgatgcccaatac
cgtcaggtcttcaaggctttacttccttttgagaaagaggaaaagaagagggtaattgac
cacattgacaaaatatcaactgttagaaaatgtagctttatatcagctgcttccgacatc
tttagtgcaaaggtttctggtaccttcaagaggagtcagctcacccaaggacgcaaggtg
ctgtcaacacttgagatagtatcaaaacttgttcacagggaacaatcaatttcagctgtc
ataacctcagtagcaaacatggtacctcagaaataccttcttgagcaacgggcaattatt
gatgttgatggaggaaaattgttgaatgaagacaatgacatcagatctgttcttcagtac
ttgctggatgacgtctctgaatttttatcaactaaattccttgctgtggaaggggctagc
aaaattatagtagaagaaaaaggttgtgttaatgtgctcaaagcttttattgacttcata
tctgagcgcgagagagaaaattttcgctctaggagacataataatgaaaactctgtcacc
ttgactaccattcatcagtcaaaaggcttagaatgggatgttgttttcattgttaaggcg
aatgaatctgaaattcctttgttgcatgaatttaatggcgttgcaaaggaaaatgggacc
tcaattgaggaggaaaggcgcctgttatatgttgccatgactcgtgctcggaaaagactt
ttcattctgtatgtcatgatggattccaattggcagatgcttcaaccatcaagatttctc
aaagaaattccagatcatcttcgagaggttcaggctgaactcagtatacaagatttacaa
acaaagcaggaacacattccaaatgaaaccatgcagttttccgttgatctaccaagagaa
aaagaactttctgaagtagatatggtgccagatgagttcctaaatacttgtaattataag
gcttcagaagagtggaaagaaccagttgaggcaagcaatgggaatagtttcttaagaaga
ttcagtgtcgaggatagattggttatttcccatttattccataaatgggctaagaagcaa
gcatttcaaaatcctaagaggttgcttgacaaggtgggctttgtgattgatgaacgccta
agagccaagaaaaacaaacacaaggatgttttgagtgctctgaagtcttgcttgagctgt
gatgaagcatttcaatatgcagaatatgttttgagatgggagaaaattcctgctgataaa
cgtgcccatttcatgcgggaaaagcaggagcatttccaaaaactaaggattgagaattca
atgggttcatcagaaccaacatgtaaacagatctcttttttgcaaagtttgggatgcact
gtcaccccttcatcgcgtctccatgcttcacgtttgatcgagcagtataaatcattgtga
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