Alnus glutinosa (common alder): 133870184
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Entry
133870184 CDS
T10577
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03013
Nucleocytoplasmic transport
aglu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133870184
03015 mRNA surveillance pathway
133870184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133870184
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133870184
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_ACIN1
DUF2782
Motif
Other DBs
NCBI-GeneID:
133870184
NCBI-ProteinID:
XP_062163232
LinkDB
All DBs
Position
6:7244808..7275052
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AA seq
277 aa
AA seq
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MANPCGGRRSPPSESGLDYVSRSLSPSRSRSSSTPHLRKRGHELRRGRSSSYSKSPRPLK
VARRSRSRSPRKEASSIEMSRVLRIENLSKNVNESRVKEEFGSFGKLVNVKVNPPKGIGY
VEFEERVVADIAKLYMDGAKFEGNTIDVDFTLSPLQKVTPLLKAITNDNIVVDGGKDGLK
QQREDSPHWKHPASPRRRSLVAQRGGSPRRLPDPPARRQADSPVCRQVESCYGHGDTPLR
WRLTSPSNGPSALPARPLRGSSSNSSRGSSPLPPRKP
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatccatgtggaggccgtcggtcgccgccgtcggagtctggtttggactacgtc
tctcgatccctttcgccttccagatctcggtcctcaagcacccctcatttgaggaagaga
ggtcatgaactgagacgtgggaggtcatcatcctactctaaatcacctcgtccgctcaag
gtagcccggagatcaaggagtcgtagtccgagaaaggaagcctcttctattgaaatgtcg
cgcgttcttcgcattgagaacctcagcaagaatgtgaatgaaagccgtgtaaaagaagaa
tttggttcatttggcaaacttgttaatgtgaaggtcaatcctccaaaaggaattggatat
gtggagtttgaggaaagagtggtagctgatattgcaaaattatatatggatggtgccaaa
tttgaaggaaatactattgatgtagatttcacattgtctccactacagaaagtgacacca
ctcctaaaagccattaccaatgataatatcgttgttgatggtgggaaggatggactcaag
cagcagagggaagattctccccattggaagcatcctgcctcaccaagaaggagatccctt
gttgctcaaaggggtggatctcctagacgattgccagatcctcccgcgcgtcgtcaagca
gattctcccgtgtgtcgtcaagtggaatcttgttatggacatggtgatacacctctgaga
tggaggctcacatctccaagcaatggtccatctgcactccctgcaaggcctttgagagga
agcagtagcaacagcagccgcggaagttcaccactgccacctcgtaagccatag
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