Alnus glutinosa (common alder): 133870194
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Entry
133870194 CDS
T10577
Name
(RefSeq) pre-mRNA-processing protein 40A
KO
K12821
pre-mRNA-processing factor 40
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03040
Spliceosome
Brite
Spliceosome [BR:
aglu03041
]
Complex A
U1 snRNP components
U1 related factors
133870194
Complex B
133870194
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GFIT
Other DBs
NCBI-GeneID:
133870194
NCBI-ProteinID:
XP_062163248
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Position
6:24934369..24964102
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AA seq
1126 aa
AA seq
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MANNSQSSGSQPLRPPAAVSLGPQSFGSSLSMQFRPVVPTQQGQPFVPSVSPQFRPVGQG
FPSNVGMPVSQSQQLQFSQPIQQLPSRPNQPGHNAPPPQALQMSYVQTNRPHASVPLQSQ
QSAPPLTNHMPGLAGSGIPISSSYTFAPSSFGQQQNIMSIPSQFQPMSQMHAHAVPAAGQ
PWMSSGSQSVAPPVPPVQQTGQQPSVIPSTDSAVNIPSQQSSDWQEHTSTDGRRYYYNKR
TKLSSWEKPAELMTPIEKADASTVWKEYTSAEGRKYYYNKVTKDSKWTIPDDLKLAREQA
QKAVSQGTQPETSGSSHAPDVVTVSSVETAVATVSAGTSTTSTLPGVALSPVPVTPVVAV
SNPSPVMVSGSPTISGAQSTVSTSAVGIHHHALAAATPPRAVSGSAGVPDISMKANPAPM
SHFENLASQEFQGSIDGASVQDIEEAKKGMAVAGKINVTPLEEKPLEDEPLVYASKLEAK
NAFKTLLESVNVQSDWTWEQAMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERR
MKQIKAREEFTKMLEESKELTSSTRWSKAVSMFENDERFKAVERTRDREDLFESYMVELE
RKEKEKAAEEHRWSISEYKKYLESCDFIKANTHWRKVQDRLEDDERCSRLEKLERLLIFQ
DYIRDLEKEEEEQKKIQKEQLRRAERKNRDEFRKLLEGHVAAGILTAKTHWRDYCLKVKD
SPQYQAVASNISGSSPKDLFEDIAEELEKQYHDDKTRIKDAVKLGKFTLVSTWMFEDFKA
AILDDLGSPPISDINLKFVFEELLERTKEKEEKEARKRQRLADDFTKLLYTFKEITVSSN
WEDCKPLFEESQDYRSIGEESYRREIFEAYIAQLQEKAKEKERKREEEKAKKEKEREEKE
RRKEKDRKEKEREREREKGKERSKKDETENENVDVTDSHVNKEDKKREKERDRKHRKRHQ
SATDDINSDKDEKEESKRSRRYDISSDKDEKEESKRSRRHEISSDKDEREEPKRSRRHEL
SSDKDEKEEPKRSRRHDISSDKDEREEPKRSRRHDISSDKDEKEESKKSRRHGSDRKKSR
KHAYSPESDSENRHKRHKRDHRDGSRRNGGYEELEDGELGEDGEIP
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggccaataattcccagtcctctggttcacagccacttcggcctcctgcagctgtatcc
ttgggtcctcaaagttttggctcatctttatctatgcagtttcggccagttgttccaaca
cagcaaggacagccatttgttccatcggtatccccacagtttcggcctgtagggcagggt
tttccttcaaatgttgggatgcctgtgagtcaaagccagcaactgcagttttctcaacca
attcagcagttaccttcaaggccaaatcagcctgggcataatgcgccaccaccacaggct
ttacaaatgtcttatgttcagacaaacaggccacatgcatctgttccactgcaatctcaa
caaagtgccccccctttaactaatcatatgcctggcttagctggctctgggatacctatc
tcttcatcatatacttttgcaccgtcttcttttggccagcaacaaaatattatgagtata
ccctcccaattccagccaatgtctcaaatgcatgcacacgctgtacctgctgcggggcaa
ccctggatgtcctctggaagtcaaagtgtagcgccgcctgttccaccagtacagcagact
ggccaacaaccttcagtcattccttctacagattctgcagtaaatattcctagtcaacag
tcatctgattggcaagagcatacatctactgatgggagaagatattattataacaagagg
acaaaactgtctagttgggagaagccggcggaattgatgaccccaatcgagaaggctgat
gcatcaactgtttggaaggaatacacttctgcagagggaagaaagtattactacaacaag
gttacaaaggactctaaatggacaataccagacgatttgaagttggctcgtgaacaggct
caaaaagcagttagccagggtacacaaccagaaacaagtgggagttcgcatgctccagat
gttgttactgtctcctcagttgaaacagctgtggctactgtctcagctggcacctccact
acttcgacattacctggggttgctttgagcccagttccggtgacacccgttgttgcagtt
tctaatccttcccctgttatggtttctggatcaccaaccatttctggtgcacaatctact
gtatcaacaagtgctgttggtattcatcatcatgcactagctgctgctactccacctagg
gctgtttcaggaagtgctggagttcctgatatttcaatgaaagccaacccagcaccaatg
agtcatttcgaaaacctagcatctcaagaatttcaaggttctatagatggagcttctgtg
caggatattgaggaagccaaaaaaggaatggcagttgctggaaaaattaatgtgactcct
ttagaggagaaaccacttgaggatgaacccttggtgtatgccagtaagctggaggcaaaa
aatgcattcaaaactctgctggaatctgttaatgtgcagtctgattggacttgggaacag
gcaatgagggagataattaatgacaaaagatatggggctctgaaaacgcttggtgagcgg
aagcaagcatttaatgagtacttaggtcaaaggaagaaactcgaagctgaggagaggcgc
atgaagcagataaaagctcgggaagaattcacaaagatgttggaagagtccaaggaactc
acgtcatccaccagatggagcaaagctgttagtatgtttgaaaatgatgaacgattcaag
gctgttgaaagaactagagaccgggaggatctttttgaaagctacatggtggaacttgaa
aggaaggaaaaggaaaaggctgctgaggagcataggtggagtatatcagagtacaagaaa
tatttggaatcctgcgactttattaaggcgaatacccactggagaaaagttcaagatcgc
ttagaagatgatgaaagatgttcacgtcttgaaaaattggaacgtttgctcattttccag
gactatatacgggacctggagaaggaagaagaggagcaaaaaaagatacagaaggagcaa
ttgaggcgggctgagcggaagaaccgtgatgagtttcgcaagcttttggaaggacatgtt
gctgctggcattctcacggctaaaactcactggcgtgattattgcctaaaggttaaggat
tcacctcaatatcaagctgttgcatcaaacatctctggttcctcaccgaaggatttattt
gaggacattgctgaagaattagagaaacagtatcatgatgacaaaactcgtataaaggat
gcagtgaagttggggaagtttaccttggtgtcgacctggatgtttgaagactttaaggca
gctattcttgatgatcttggttccccaccaatatcagatatcaacttaaagtttgtgttt
gaggagttattagagagaaccaaggagaaggaggagaaggaagctagaaagcgtcaacgt
cttgccgatgacttcactaaactattgtacacattcaaggaaattactgtatcttctaat
tgggaggattgtaaaccactttttgaagagagccaagattatagatcaattggggaggag
agctataggagggagatttttgaggcatacattgcacaattacaggaaaaggctaaagag
aaggagcgcaagcgtgaggaggagaaggccaaaaaagagaaagagagagaggagaaagag
aggcgaaaggagaaagatagaaaggagaaagagagggaacgtgaaagagaaaaaggaaag
gaacgatctaagaaggatgaaacagaaaatgaaaatgtagacgtgactgacagtcatgta
aataaagaggataaaaaaagagaaaaagagagagatcggaaacaccggaagaggcatcaa
agtgccacagacgacataaattctgataaggatgagaaagaagagtctaaacgatcgcgt
agatatgacataagttctgataaggatgagaaagaagagtctaaacgatcacgcagacat
gaaataagttctgataaggatgagagagaagagcctaaacgatcacgcagacatgaatta
agttctgataaggatgagaaagaggagcctaaacgatcacgcaggcatgacataagttct
gataaggacgagagagaagagcctaaacgatcacgcagacatgacataagttctgataag
gatgagaaagaagagtcaaaaaaatcacgtagacatggcagtgaccggaaaaaatcaaga
aagcatgcatactcacctgaatcagacagtgaaaaccggcataaaagacacaagagagat
caccgggatggttcccgtagaaatggtggatatgaggaacttgaagatggcgagcttggt
gaggatggggaaatcccatag
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