KEGG   Alnus glutinosa (common alder): 133870363
Entry
133870363         CDS       T10577                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
aglu  Alnus glutinosa (common alder)
Pathway
aglu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:aglu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    133870363
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aglu03021]
    133870363
Enzymes [BR:aglu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     133870363
Transcription machinery [BR:aglu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     133870363
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 133870363
NCBI-ProteinID: XP_062163450
LinkDB
Position
6:complement(2456081..2466553)
AA seq 1183 aa
MGASSEAKEDMDLDLDDDEFLESSSIHDLDEESLRRFCKKAAMSFFNEYGLISHQINSYN
DFIKNSLQKIFDSFGEIVVEPGYDPSKKGESEWRYASVRFGKVNLDKPSFWGGESGDGNG
KEYNMLPRHARLQNMTYSSRMKVNIHVQVYTQKLVRSDKFKTGKDQYIDRSIVSEDNRDI
IIGRIPVMVKSDLCWMKEAEKGDCDFDHGGYFLVKGAEKTFIAQEQISLKRLWILNSQGW
TVAYKSEMKKNRLIMKLVEVSKVEDIKGGEKVLTVYFLSTEIPLWILFFALGVSSDREVI
DLIDYDSEDASISNILFASIHDADERCEGFRIGKKALTFVDKLVKSTKFPPGESIEECIS
KYLFPSLNVPKLKASFLGYMVKCLLQAYSGRRKCDNRDDFRNKRFDLAGELLERELKVHL
AHARRRMAKVLQRDLYGDRIVRPIEHYLDASIITNGLTRAFSTGAWSHPFKRMERISGVV
ATLGRTNPLQTMAEMRRTRQQVQYAGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNLA
ITGLVSTNILEPVSSKFFDCGMEELADDASLRGKYKVFLNGEWVGVCKDSISFVAQVRNK
RRRKQLSHQLEIKRDEKHEEVRIFSDAGRILRPLLVVENLTKIKGYKVENYTFQSLLYKG
IVELIGTEEEEDCRTAWGVKYLFMEKEGNSPIKYTHCELDMSFLLGLSCGIVPFANHDHA
RRVLYQSQKHSSQAIGFSTTNPDIRVDTLSHQLHYPQRPLFRTMTSDCLGKPGYPLGQHG
ILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNKASLERGMFRSEHIRSYKAEVDNKESLE
KRRKADDCVNFGKIQSKIGRVDSLDDDGFPFIGANLQSGDIVVGRCADSGADHSIKLKHT
ERGMVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQ
GIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSLRYATPFSTLSIDAITEQLHRAGF
SRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKR
FGGVKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICRKCKNVANVIQRAVPGGRKIR
GPYCRICESVDDIIKVNVPYGAKLLCQELFSMGISLKFETRLC
NT seq 3552 nt   +upstreamnt  +downstreamnt
atgggggcatcatcagaggccaaggaagatatggatttggatttagacgatgatgaattt
cttgagtcaagtagcatccatgatttggatgaagagtctcttagaagattttgtaagaag
gcagcaatgtcatttttcaatgagtatggtctgatcagtcaccagatcaactcgtacaat
gattttatcaagaatagtcttcaaaagatcttcgattcttttggtgagattgtagttgag
cctggctatgatccatcaaagaaaggagaaagtgagtggcggtatgcgtcggttaggttt
gggaaggtcaaccttgataagccaagcttctggggtggtgagagtggtgatggaaacggg
aaggagtacaatatgcttcctaggcatgcccggcttcagaacatgacatactcatcaagg
atgaaagtgaatattcatgtacaggtttatactcaaaaacttgttagaagtgacaagttt
aaaactggaaaagatcaatatattgacaggagtattgtaagtgaagataatagggatatc
ataatagggaggatccctgttatggtgaagtctgacctgtgctggatgaaagaagccgag
aaaggtgattgtgatttcgatcatggaggttattttttagttaagggtgcagagaagaca
tttattgcacaagagcagatcagtttgaagaggctttggattttgaatagtcaaggttgg
acagttgcatacaagtcagaaatgaagaagaataggttaatcatgaagctagtggaggtt
tctaaagttgaggatatcaaagggggagagaaagttcttactgtatattttttgtcaaca
gagatccctttatggatattgtttttcgctcttggtgtgtcatcagacagagaagttatt
gatctgatagattatgacagtgaagatgccagcatatcaaatatactatttgcatcaatt
catgatgctgatgagagatgtgagggatttcgtatagggaagaaagctcttacttttgtg
gataaacttgtaaagagtaccaaatttcctcctggggaatctattgaagagtgcattagc
aagtatctgtttcccagtctcaatgttccaaagctaaaggcaagttttcttgggtatatg
gtgaagtgcctcttacaagcttactctggccgcagaaaatgcgataacagggatgatttt
agaaacaagaggtttgatttggctggtgagctgcttgagcgagagctgaaagtacatctt
gcacatgcacggaggcgcatggcaaaggttctgcagagagacctttatggagatcgaatt
gtgcgtccaattgaacactatctggatgcttctataatcaccaatggtcttacgagggcc
ttctcaactggagcatggtcgcatcctttcaagaggatggaaaggatttcaggtgtagtg
gcaacactagggcgaacaaatccattgcagacaatggctgaaatgaggaggacacggcag
caggttcagtatgctgggaaggttggagatgccagatacccacatccttctcactgggga
agggtatgctttctctctactccagatggtgaaaattgtgggcttgtaaaaaatttggcc
attactggactagtaagcacaaacatattggagcctgtaagttccaaattcttcgattgc
gggatggaggaattggcggatgatgcttcactacggggaaagtataaagtgtttttgaat
ggagagtgggtaggagtttgtaaagattccatttcatttgttgcacaggtcagaaacaag
agacgcaggaagcagttgtcacatcagttggaaatcaaaagagatgaaaaacatgaagaa
gtacgcatattttctgatgctggaaggattctacgtcctcttctagttgttgagaatttg
acaaagattaaaggatataaagttgaaaattacacattccaatctcttttgtacaaggga
atagttgagctaattggaactgaagaagaagaagactgtcgaactgcatggggtgttaaa
tatttgttcatggaaaaagagggtaattcacctattaagtatacccactgcgaacttgac
atgtcatttttattaggtttgagctgtggaattgtcccatttgcaaatcatgaccatgca
aggagggtcctttaccagtctcagaagcactcttcacaggctattggattttccacaaca
aatcctgacatcagagtggatactctgtctcaccaattacattatccccagaggccactt
tttcgtacaatgacttctgattgtcttggaaaaccagggtatcctctgggtcaacatgga
atactgccaaagcctgaattctacaatggtcagaatgctatcgtggcagtcaatgttcac
ctagggtacaatcaagaggattccttggtaatgaacaaggcttcgttggagcgtggtatg
tttcggtctgagcacatcagaagttataaggctgaggttgacaacaaggaatcattggaa
aagcggcggaaggctgatgactgtgtaaactttggaaagattcaaagtaagattggacgt
gttgacagccttgatgatgatggtttccctttcatcggtgcaaacctgcagagtggtgac
attgttgtagggaggtgtgcagactcaggggctgatcacagtataaaactgaagcacact
gaaaggggcatggttcagaaagttgtgctctcttctaatgacgatggaaagaattttgct
gtggtgtccctgcgacaggttcgatccccatgtctcggagacaaattctcaagcatgcac
gggcagaaaggtgtgttaggttttttggagtctcaagagaacttccctttcacaatacaa
gggatagttccagatattgtaataaatccacatgcatttccttcacgacaaactcctggt
caactcctagaggctgctttaggaaagggaatagcctgtggtggatcattgagatatgcc
acccctttttccacactctctattgatgccatcacggaacagcttcacagggctggattt
tcaagatggggaaatgagagagtatacaatggccgaactggtgaaatggttcgttccctc
atatttatgggcccgacattctatcagcgtctgatccacatgtctgaagacaaagtaaaa
tttcgcaacactggtccggttcatcctcttacccgacaaccagtggcagaccggaagcgt
tttggtggggtgaagtttggtgagatggagcgtgactgtcttatagcccatggtgcctca
gcaaacctgcatgaacgcctctttacactcagcgactcctcacagatgcacatttgccgg
aaatgcaaaaatgttgcgaatgtgatccaacgggcagtgcctggtggccgtaagattagg
ggtccatattgccggatttgtgaatcagtagatgacattattaaggttaatgtaccttat
ggggccaagttattgtgccaggagcttttcagcatgggcataagtctgaagtttgaaacc
cggctctgttaa

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