Alnus glutinosa (common alder): 133870558
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Entry
133870558 CDS
T10577
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133870558
03036 Chromosome and associated proteins [BR:
aglu03036
]
133870558
Enzymes [BR:
aglu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
133870558
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133870558
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
133870558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MOV-10_beta-barrel
Motif
Other DBs
NCBI-GeneID:
133870558
NCBI-ProteinID:
XP_062163705
LinkDB
All DBs
Position
1:8447161..8459649
Genome browser
AA seq
734 aa
AA seq
DB search
MDLIVGVFRRIFGSQDERRDDNDDHNVRNRNPVHENLRANTTTAPNFPRARVTPSIPFYQ
PNVGDSPTTNPQHSQRKPLERTNDLHQNSTSRSSPLPPTYPYRPPQSSSKPPQYYSTPSP
SSSKSATSSSKPPPSFPNALSSSSKPHQSISKLSPASSSLKDPTYSSKSFASSSNLPPSS
FSPSSKSFASSPNTPNPPPDSSPTYSKPHPSSPSLAPSSSKPLQSSPKPVSSHKPSLSSP
KGLPSSSGPSAFPHNGTPPSSSQTPAFKPILYMAPSDVVNEESKMSYVLGKGTSPIYAIP
EDIKDLIKKDIVPTVLKQPLSPSTYKRYFAALLYAEDYYLEKWSNFQLKNVILELHEAEI
IKRSNQHKYYNRSVEKDDKIFVVFKFDSIPEKRPFLLSRDLVYARPSGKNVEPFRGVIYR
VVKSTHVLVEFGDDFHSQHHSTGKYDISFSFNRVCLKRAHQAVEAASDPLFQNILFPDCI
SRENILNPPAQLSAYRELGIDEFAAVHHILSFRGSPPYLLGGSLSVTRAGKSVTEETRSV
SRTGVVVREAVFEAYKTSPNNRILVCAPINSTCDVLNRSLKKKIPESDMFRANAAFREID
GVPTDILSSCPIEGECFACPSLPQLQRFRIILSTFVSSFRLHNEGIAAGHFSHIFLVDAS
SATEPEVMVALSNFADDNTAVIVTGAPRDHSGWVRSEVGRKYGLRKSYFERLHELRPYRS
TNPKFITKLDAFGR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggatcttattgtaggagtctttcgacgcatctttggttcccaagacgaacgtcgtgat
gacaatgatgatcataacgttcggaacaggaatccggtacacgaaaatcttcgagcgaat
acaacaaccgcacccaattttccaagggcacgggtgacgccgagtattccattttatcaa
ccaaatgttggcgattcacctacaactaatccacaacatagtcagaggaagccattggaa
agaactaatgaccttcatcagaattcaacaagtcgttctagtccattgccacctacatat
ccttatagaccacctcaatcttcatctaaaccaccccaatattattctactccatctcct
tcatcctctaaatccgcaacatcttcatctaaaccgcctccatctttccccaatgcattg
tcatcttcctccaaaccacaccagtctatatcaaaactgtctccagcttcgtcttccctt
aaagacccaacgtattcttctaaatcttttgcatcttcatctaatctgcctccctcttct
tttagtccatcttctaaatcgtttgcatcttcccccaacacccctaaccccccaccagat
tcttctccaacttactctaagccacatccatcttcaccttcactagccccatcttcatct
aagccactccagtcatccccgaaacccgtgtcttcacataaaccatctctatcttcccct
aaaggacttccatcttcctctggaccatcggcatttccccacaatggaactcctccttcc
tcttcacaaactccggcctttaagccgattctttatatggctccatctgatgtagtaaat
gaagaaagtaagatgagttatgtattgggaaaaggtacatcacctatatatgcaattcct
gaggatatcaaagatctaatcaagaaagacatcgtgcctacagttctaaagcagcctttg
tctccttcaacttataagcgttactttgctgctctgttatatgccgaggattactacctg
gagaaatggagtaatttccaattgaagaacgtgattttggagttgcatgaagcagaaatt
ataaaaaggtcaaaccagcacaaatattataacagaagtgttgagaaggatgataaaatc
tttgtggtatttaagtttgattccattcctgagaagcggccattccttttatcaagagac
ttggtctatgcacgaccttcgggtaaaaatgtcgagccgtttcggggtgtcatctatcgc
gtggtgaagagcactcatgtactagtcgaatttggagatgatttccattcacagcatcat
tcgaccggcaaatatgacattagcttctcattcaacagagtctgtctaaaaagggctcac
caggcagttgaagctgcatcagatcctttgttccagaacatcctctttcctgactgcatc
tcccgagagaacatccttaacccaccagctcagttgtctgcctatcgggagcttggtata
gatgagtttgctgccgttcatcacattttaagctttcgcggctccccaccttatcttctt
gggggctcactcagtgtaactagagcaggtaagtctgtaactgaagaaaccagatcagta
tcaagaactggagtggttgttcgagaagcagtatttgaagcatataaaacctccccaaat
aatcgaattcttgtatgtgctcctataaacagcacatgtgacgtgttgaacagaagtctg
aagaagaagatcccagagtcggatatgtttcgagccaacgccgcatttcgagagatagac
ggggttcctactgacattcttagctcatgtcctattgaaggggaatgttttgcttgtcct
tcactcccgcaacttcagagattcaggataattctctcgacttttgtgagtagctttcga
ttgcacaatgaaggcatagctgccggacattttagtcatatttttctagtggatgcctca
tcagccacggagccggaggtaatggtagctttgtctaattttgctgacgataatacagca
gttatagttacgggtgcacccagagaccattcaggttgggtccgctctgaagtgggtagg
aaatatggattgaggaagtcatattttgaaagacttcatgaactcaggccatataggagc
accaatccaaagttcatcacaaagctagatgccttcggccgatag
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