Alnus glutinosa (common alder): 133870829
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Entry
133870829 CDS
T10577
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
133870829
Enzymes [BR:
aglu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
133870829
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
133870829
NCBI-ProteinID:
XP_062164045
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Position
6:complement(26134900..26144140)
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AA seq
640 aa
AA seq
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MSAPGVRLHVQDRYVVMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNKESNRGYWDLV
WSAPGSKGIFDVISGTSFRVIVENEDQVELSFTRMWDPTLEGKFVPLNIDKRFIMLRGSS
GFYSYAIYEHLKDWPDFEIGETRITFKLRKDKFRLMAIADDRQRYMPQPDDRSSGRCEIL
AYPEAVLLVNPTMPQHKGEVDDKYQYSCDNKDIRVHGWISSSPHVGFWQITPSDEFRSGG
PLKQSLTSHVGPTTLAMFLSAHYAGQDLVPKFRAGEPWKKVFGPVFIYLNSAPIGDGPFW
LWEDAKIQMMNEVQSWPYSFPASEDFQKADQRGNVNGRLLVLDRYTSRDHIPANGAYVGL
APPGDNGSWQRECKDYQFWVRADEGGYFSITNIRTGDYNLYAWIPGFIGDYRCDTAITIT
SGSYIEMGDLVYEPPRDGPTLWEIGIPDRSAAEFFVPDPDPKYINKLYVNHPDRFRHYGL
WGRYADLYPDTDLVYTIGVSDYSKDWFFAQVPRKKEDGTHEGTTWQIKFKLNNVDRTNTF
KLRVAIASATLAELQVRINDPKAKRPLFTSGLIGRDNSIARHGIHGLYWLYNVNIPGAQI
VEGDNTIYLTQPRSTSPFQGIMYDYIRLEGPPSSSVKDEL
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctccaggggtgcgattgcatgttcaagatcgttatgtggtgatggataatggc
attgttcaagtcacattatcaaacccagatggaattgttactggaattcgatataatggc
gtcgacaatttgcttgaagttcttaataaggaatctaacagagggtattgggaccttgtc
tggagtgcaccaggaagcaagggaatatttgatgtgatttcaggaacaagttttagagtt
atagtggaaaacgaggatcaggtcgagctttcatttacaagaatgtgggatcccacactg
gagggcaagtttgttcccctgaatatagacaaaaggtttataatgcttcgtggttcctcg
gggttttattcttatgccatttatgagcacttgaaggattggcctgattttgaaattggt
gaaaccaggatcactttcaagctcagaaaagacaagtttcgcctcatggccatagcagat
gataggcaaagatacatgcctcagcctgatgacaggtcatcaggaagatgcgaaatcctg
gcctaccctgaagctgtcctacttgtcaatcccacaatgccacaacacaaaggagaggtg
gatgacaaataccagtactcttgtgacaacaaagatattagggtacatgggtggatatct
agtagcccacacgttggattctggcaaatcacacctagcgacgagttccgatccggtggg
cccctcaaacaaagcctaacctcacatgttggccccaccacccttgcgatgtttcttagc
gctcactatgctggacaagacctggtgccaaaattcagagctggtgagccatggaagaag
gtttttggcccagtatttatctatcttaattctgcacctatcggagatggtccgttttgg
ctatgggaggatgctaaaatacagatgatgaacgaagtccaaagctggccttatagtttt
ccagcttctgaggattttcaaaaggctgatcaacgcggtaatgttaatggtagactactt
gtcttagataggtatactagcagagatcatataccagcaaatggtgcttatgtaggcttg
gccccaccaggagacaatggatcatggcaaagagaatgcaaggactatcagttttgggtg
agagcagatgaaggaggctatttttccatcaccaatattcgtactggtgactataacctc
tatgcgtggatccctggctttataggagattaccgatgcgatactgccattaccataacc
tcaggttcttatattgaaatgggtgatcttgtatatgaacctcctagagatggacccaca
ttgtgggaaataggcatccctgatcgttctgctgcagagttctttgttcccgaccccgat
ccaaagtacattaataaactttatgtcaatcatcccgacaggttcaggcattacggattg
tggggtaggtatgcggacctatatcccgatacagatttagtatacaccatcggtgttagt
gattatagtaaagattggttctttgctcaggttcccaggaagaaagaagatggcacacat
gaaggaacaacttggcaaatcaagttcaaacttaataatgtggatcggacaaatacgttc
aaactgcgagtggcaattgcatctgcaactctggctgaattgcaggtgcggattaacgat
ccgaaagcaaagcgacctctatttaccagtggattaatagggagggacaattcaattgct
agacatggaattcacgggctctactggctatacaacgttaatataccaggtgctcagatt
gttgaaggagataatactatctatttgacacaaccaagaagcaccagccccttccaggga
attatgtacgactatattcgtttagaaggtccgccatcttcctctgtcaaagatgaactt
tga
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