Alnus glutinosa (common alder): 133870876
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Entry
133870876 CDS
T10577
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
133870876
Enzymes [BR:
aglu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
133870876
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
133870876
NCBI-ProteinID:
XP_062164113
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Position
6:complement(26124048..26133849)
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AA seq
641 aa
AA seq
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MSPLGVHLHVGDRHVVMDNGIVQVTLSNPGGIVTGIRYDDIDNLLEVINDESNRGYWDLV
WNPPASTATGGIFDVIKGTSFKIIVENEEQVELSFTRTWDPSMEGKGVPLNIDKRFIMLR
GSSGFYSYAIYEHMKEWPAFNLDETRIAFKLRKDKFHYMALADNRQRYLPLPDDRLPPRG
QPLAYPEAVLLVNPVEPELKGEVDDKYQYSNDNQNIRVHGWISTDPPVGFWQITPSNEFR
SGGPRKQNLTSHVGPTTLAMFLSAHYSGDDLVPKFGAGEQWKKVFGPVFMYVNSLYDGED
PVLDQLWEDAKTQMLIEVQSWPYTFPASEDFPNSDQRGNVSGRLLVLDRYISNDYISANG
AYVGLAPPGDVGSWQRECKDYQFWTKAEEDGYFTINDIRTGDYNLYAWIPGFVGDYKYDV
IINITAGYDIDVGDLVYEPPRDGPTLWEIGIPDRSAAEFYVPDPNPKYINTLYVNHPDRF
RQYGLWERYAELYPDNDLVYTVGVSDYTKDWFYAQVTRKKKDSNTYQGTTWQIKFKLDDV
DRNGTYKLRVAIASATISELQVRVNDPKANPPLFSSGLIGRDNSIARHGIHGLYWLYNVD
VPGARLVEGDNIVFLTQPRSTSPFQGIMYDYLRLEGPPSSS
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcctctgggggttcatttacacgttggagatcgtcatgtggtaatggacaacggc
attgtacaagtcacgctatcaaatccagggggaattgttactggaattcgatatgatgac
attgacaacttgcttgaagtcattaacgatgaatctaatagagggtactgggaccttgtt
tggaaccccccagcaagcacagcaactggtggtatatttgatgtaatcaaaggaacaagc
ttcaaaattatagttgaaaatgaggaacaggttgagctctctttcacaagaacctgggat
ccttccatggagggcaagggtgtcccattaaatatcgacaaaaggtttataatgctccgt
ggttcatcgggattttactcttacgctatttacgagcacatgaaggaatggcctgcattc
aaccttgatgaaaccaggattgctttcaagctcagaaaagacaagttccactatatggcc
ttagcggacaataggcaaagatacttgcccctcccggacgaccgattgcctccaagaggc
cagcccctggcctacccagaggctgtcctactcgtgaacccagtggagccagagctcaaa
ggagaggtggatgacaagtaccaatactccaatgacaaccaaaatattcgggtacacggg
tggatctctaccgacccacccgtgggattctggcaaatcacacccagcaatgagtttcga
tccggtggtccccgcaaacaaaacctaacatcacatgtgggccccaccacccttgcaatg
tttcttagtgcacattattccggcgacgatctggtgccaaaatttggagctggtgagcaa
tggaaaaaagttttcgggccggtttttatgtacgttaattcattatatgatggagaggac
ccagttcttgatcagctatgggaggatgccaaaacacagatgctgattgaagtccaaagc
tggccctataccttccctgcgtcggaggattttcccaattcagaccaacggggtaacgtt
agtggtagacttctagtcctagacaggtatattagcaatgactatatatctgcaaatggt
gcttatgttggcttggcgcctcctggagacgttggatcatggcaaagagaatgcaaggac
taccaattttggaccaaagcagaggaggatgggtattttacgattaatgatatacgtact
ggggattataatctttatgcatggatcccaggttttgtcggggactacaaatatgatgtt
atcattaacataacagcaggttatgatattgatgttggtgatcttgtttatgagcctcca
agagatggccccacgctgtgggaaataggcatccctgatcgttctgccgcagagttttat
gttcctgatccaaatccaaagtacatcaatacactctatgtcaatcatcccgacaggttt
aggcagtatggtttgtgggaaagatacgcagaactgtatcctgataacgacttggtttac
acggttggcgttagcgactacactaaagattggttttatgctcaggttaccaggaagaaa
aaagacagtaatacatatcaaggaactacgtggcaaatcaaattcaagctggacgatgtg
gatcgtaatggcacttataaactgcgagtggcaatcgcttctgccactatttctgaattg
caggttcgggtaaacgacccgaaagcaaatcctccactgttttcaagtggactgataggg
agggataactcaattgctagacatggaattcacggcctctattggctttacaacgtggac
gtaccaggtgctcggcttgtcgaaggggataatatcgtctttttgacgcaaccaagaagc
acaagccctttccaagggattatgtatgattatctccgtttagaaggcccgccatcttct
agttaa
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