Alnus glutinosa (common alder): 133870952
Help
Entry
133870952 CDS
T10577
Name
(RefSeq) uncharacterized protein LOC133870952
KO
K19022
AP-5 complex subunit beta-1
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aglu03400
]
133870952
DNA repair and recombination proteins [BR:
aglu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
133870952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
133870952
NCBI-ProteinID:
XP_062164239
LinkDB
All DBs
Position
1:8985263..8994202
Genome browser
AA seq
1107 aa
AA seq
DB search
MTEKVAPPAKPLSPQDWESLIDDFQYGGPRRNKWSSLYPVPSLLELALSSILKRDFPLKL
HLLLFLEEFCDALFISQEPQFLDRLLEALRLIVQSPLDGTHITFTLKDQMLVSTTSIFIT
LDVFHRFGIRYTETLVELLLIIVNRPNHGADRQTRAVACECLRELERFHPCLLSDIAGHL
WSLCQNERTHASQSYILLFTWVIHNIVTNKSSVSILNTSLPLVPFNVPQSLLLDGSSNSA
NTGLNYKELRRAMAFLLESPQVLTPCGMAEFMAMMTPVAVALDLQASMLKVQFFGMLCSY
DPMLCHVVLMLYLQFSDAFDGQEGEIAGRLLLISRQVQHNLVFRLLALHWLMGFNQLISS
REVNKKKAMVVEMGLSFYPRVFDPLALKALKLDLLAFCAVCMESLTSEIASDAGKSGEKL
FGDGIVSVSAFQWLPPASTETAVAFRAFRKFLIGGSSHSDADPSTTGILMESTIFNTLQK
MLVEMILEHQRLVPEIVAFIDRLLGCQKHCWLGERLLQTLDENLLPKVLIDYKLISCFPI
FDRIAANNTIPPSGLLELLTKFMVFLVEKHGSDTGLKSWSQGSKVLGVCRTMLMHHHSSR
LFLRLSRLLAFTCLYFPDLEVRDNARIYLRMLICVPGKKLRDMLNIGEQLLGISPPHSSS
FFNIQSPRTSYDLKKSRNISSYVHLERIIPLLVKQSWSLSLSTLGVGSNKPGYLEDIRDS
EAPVEEREIDGSTDIQIPETERTDRPQEPLRVMDSKISEILGTLRTYFSCIPDYRHLPGI
KVRISCTLRFESEPFNRISGVDSTSSGLDRVDALPAMYATVLNFSSSAPYGSIPSCHIPF
LLGEPPRNDIVLVEDGSGEEESFRAPVTIELEPREPTPGLVDVFIETNSENGQIIRAQLH
SITIGIEDMFLQAIAPFDIPKEAIPGYYSDLFSALWEACGTSNIGWETFPLKGGKGVAAI
SGTQSVKLLEVPATYLIQATERHLAHFVVSVIGEPLNNIVKDGGMIRDVIWKDVASESSL
EASTSITGLDQAPLHLTYFAGEDERENLVSTNKRNMGCFLILIFLPPRFHLLFQMEVCDV
STLVRIRTDHWPCLAYIDDYLEALFLT
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaaggtggcaccaccggcgaagcctctctccccgcaagactgggagagcctc
atcgatgacttccagtacggtggtcctcgccggaacaaatggagctccctctaccctgtc
ccctccctcctcgaactcgccctctcctccatcctcaaaagggacttccctctcaagctc
cacctccttcttttcctcgaagaattctgcgacgcgctattcatctcccaggagccccaa
ttcctggaccgcctccttgaggccctccgtctcatcgtccaatcccccctcgacgggact
cacataaccttcactctcaaagaccaaatgctcgtctccaccacctccattttcatcacc
ctcgacgtgtttcacagatttggcattcgctacaccgagaccttggtcgaattgttgttg
atcatcgtcaaccgccccaaccacggcgccgaccgccagacacgcgccgttgcctgcgag
tgcttgagagaattggagcgattccacccctgtttgctctccgatatcgccggacacctg
tggagcctctgccaaaacgagcggacccacgcgtcgcagagctacattctattgttcact
tgggtgatacacaacatcgtgactaacaagtccagcgtttcgatcctcaacacctcgctt
cctttggttcccttcaatgtgccgcaatcgctgctcttggacggttcttcgaactccgcg
aacacggggttgaactacaaggagctgaggagggcgatggcgttcttgctggaatcgccg
caggttttgacgccgtgcgggatggcggagttcatggcgatgatgacgccggtggcggtg
gcgttggatctccaggcctccatgttgaaggtgcagttcttcgggatgctctgttcctat
gatccgatgctgtgccatgtagttttgatgctgtatttgcagttctcggatgccttcgat
gggcaagagggcgagattgccggccggctcttgttgatttcgagacaagtgcagcacaat
ttggtcttccggttgctcgctcttcattggttgatgggtttcaatcaactgatttccagc
agagaggttaacaaaaagaaggctatggtcgtcgagatggggttgagcttctatcccaga
gtgtttgatccgctagcattgaaggctttgaagctggacttgcttgctttctgcgcggta
tgtatggagagcttgacatcggagattgcttcggacgcggggaagtctggggagaagctg
tttggagatggtattgtgtctgtgtcagcttttcagtggttgccgccggcgagcacggaa
accgcggtggcgttccgcgccttccgtaagtttttgataggtgggtcgtctcattctgac
gccgatccttccaccactggaattctcatggagtccaccatcttcaatactttacagaaa
atgctagtggagatgatcttggagcatcaaagattggttccagagattgttgcttttatt
gaccgcttgttgggctgtcaaaaacactgttggttgggagaacgcttgcttcagacattg
gatgagaatttgcttccaaaagtcttaattgattataaattgatttcttgcttcccaata
tttgatagaatcgctgcaaataatacaatacctccaagtggattgttagagctgctgacc
aaattcatggttttccttgttgagaaacatggctcagacacaggactaaaatcttggtct
cagggaagtaaagttcttggtgtctgtcgaaccatgctgatgcaccaccatagctctaga
ttgttccttagactatctcgcctccttgcatttacttgcctttattttcctgatttggag
gttcgtgacaatgcgaggatatatctgcggatgctgatctgtgtacctggaaagaagctt
agagatatgctaaacattggggagcaactccttggcatttctcctcctcattccagctca
ttttttaatatccagtctcctcgaacttcttacgatctcaagaaatctaggaacatctca
tcctatgttcaccttgagcggattataccattgcttgtcaaacaatcttggtccctgtcc
ttatcaactttgggtgtcggtagtaataaacctggttacctcgaggacatcagggacagt
gaagccccagttgaggaaagggagattgatggaagtactgatattcagatcccagagact
gaaagaactgatcgaccacaggagccattgcgtgtgatggattcaaagatttcagagatc
ttaggaaccttaagaacgtatttttcttgcatacctgattatagacatttgccagggatt
aaggttagaatatcctgcactttgagatttgaatccgagcctttcaatcgaatatctgga
gttgactctacttctagtggtttggatagagtggatgcccttcctgctatgtatgcaact
gtgcttaatttttcatcctctgccccatacggatctattccatcatgtcacatacctttt
cttcttggtgaacccccgagaaatgatattgttcttgtagaagacggttctggagaagag
gaaagttttagggcacctgtaacaattgaattagaaccgcgggaaccaacacctggtctg
gttgatgttttcattgaaacaaattcagaaaatggtcagattattcgtgctcagcttcat
agtatcacaataggaatagaagacatgtttctccaggctattgctccatttgacatcccc
aaagaggcaatacctggttattactcagacttgttcagtgctctctgggaggcatgtggt
acttccaacattggctgggagacctttccactaaaaggaggcaaaggggttgcagccatt
agtgggacacaatcagtgaagctacttgaagtccctgcaacctatttgattcaggctact
gaaaggcacctggctcactttgttgtgagtgtgattggtgaaccactcaataacattgtg
aaggatgggggaatgattagagacgtgatctggaaggatgtggcttcagaatcttccctt
gaagctagcacctccataactggtcttgatcaagccccacttcatcttacatactttgct
ggtgaagatgagagggaaaatcttgttagtaccaacaaaagaaatatgggttgctttctt
attttgatatttcttccaccaagattccatcttcttttccaaatggaagtatgtgatgtt
tcaactttagttcggattcgaaccgaccattggccatgcttagcttatattgatgattat
ttggaagccttatttttgacctag
DBGET
integrated database retrieval system
