Alnus glutinosa (common alder): 133871087
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Entry
133871087 CDS
T10577
Name
(RefSeq) uncharacterized protein LOC133871087 isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aglu03016
]
133871087
Enzymes [BR:
aglu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
133871087
Transfer RNA biogenesis [BR:
aglu03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
133871087
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
TRAM
Motif
Other DBs
NCBI-GeneID:
133871087
NCBI-ProteinID:
XP_062164431
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Position
6:789455..800118
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AA seq
617 aa
AA seq
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MEDIEDLVVGAGAPPGFRLPLNAVGVSLKKKKSNKLSQTLPSPKIPGTQTIYIKTFGCSH
NQSDSEYMAGQLSAFGYSLSDNPEQADLWLINTCTVKSPSQSAMDTLIAKCKSAKKPLVV
AGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPALDLPKVRKN
KFVEILPINVGCLGACTYCKTKHARGHLGSYTTDSLVGRVKSVIADGVKEIWLSSEDTGA
YGRDIGVNLPTLLNAIVSELPPDASTMLRIGMTNPPFILEHLKDIAEVLCHPCVYSFLHV
PVQSGSDAVLSAMNREYTVSEFRTVVDTLAELVPGMQIATDIICGFPGETDEDFAQTVSL
IKEYKFPQVHISQFYPRPGTPAARMKKVPSTFVKKRSRELTSVFEAFVPYDGMEGRLERI
WITEIATDGIHLVGHTKGYVQVLVVAPESMLGSSAIVKITSVGRWSVFGEVIETINPMNV
KSASRKDMSNQDKCSPCSDPNECACTREPETCASCGPESCGGQTTLEESAASRNPTFLED
PNSRNLIGWLLRKRKNHVDKRVGGEIASGSKKKQEWARGSMGEWGAVDKALLGGMLVSFL
TIMALLIHLGVRTLSSN
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatagaggatttagtagttggagctggtgctcctcctgggtttcgattgcca
ttaaatgctgttggagtaagtctcaaaaagaagaagagcaataagctctctcaaaccctt
ccctctccaaaaatccctggcactcagacgatatatattaagacatttgggtgctcacac
aaccagagtgatagtgaatacatggctggtcagctttcagcatttggttattcactaagt
gataatcctgaacaagcagacctgtggctgataaatacatgcacggttaaatccccaagt
cagtctgccatggacactctaatagcgaaatgcaaaagtgcaaaaaagcccctagtggtg
gctgggtgtgtgcctcaaggaagtcgagacttgaaagagttagaaggggtcagtatagtt
ggagttcagcaaattgaccgtgtggttgaagttgtggaagagacccttaaaggtcatgag
gtgcggcttttgaaccgcaagacattgccagcacttgaccttccaaaggtgagaaagaac
aaatttgttgagattcttccaattaatgttggttgtttaggtgcttgcacttattgcaag
acaaagcacgctcgtggtcatttaggtagctacacgactgatagcctcgtcgggcgtgta
aaatctgtaatagctgatggagttaaggagatatggttgagcagtgaagatactggagct
tatggtcgtgacattggggtcaatcttccaactttgttaaatgctattgtttctgagctt
cctcctgatgcaagcacaatgcttcggattgggatgacaaaccctccttttattcttgag
cacttgaaagatatagcagaggttttgtgtcatccatgtgtgtactcgtttctacatgta
ccagttcaatctgggagtgatgctgttttgagtgcaatgaatcgtgagtatactgtgagt
gagtttaggactgtggtcgataccttggctgagcttgtgcctgggatgcagatagcaact
gatatcatatgtggatttcctggtgaaacagatgaggattttgctcaaacagtcagcctt
attaaggagtacaagtttcctcaagttcatatatctcaattttatcctcgaccagggaca
cctgctgcaaggatgaaaaaagtcccaagtacttttgtgaagaaacgaagccgtgagttg
acctctgtttttgaagctttcgtgccatatgatggaatggagggcagactagaaagaatt
tggataactgaaattgcaaccgatggaattcacttggttgggcataccaaggggtacgtg
caggtgctagtggttgctccagagagtatgctgggaagttcagctattgtgaagataaca
tctgtgggaaggtggtcagtttttggggaagtgatcgagaccatcaaccccatgaatgtt
aaatcagcttcaagaaaggatatgtcgaatcaggataaatgttctccttgctctgatcct
aatgaatgtgcgtgtacaagagagccagaaacttgtgcttcttgtggaccagaaagctgt
ggaggacagactaccttagaggaaagtgctgcttcaaggaatcccacgtttctggaagat
ccaaatagcagaaatctgatcggatggttactaaggaagcggaagaatcatgtggacaaa
agagttgggggtgaaattgcgtcaggatccaagaaaaagcaagaatgggcccgaggaagc
atgggtgagtggggtgctgtcgataaggctcttctgggtggaatgcttgtgagtttcttg
acaatcatggctttactgattcatcttggagtcaggactctgtcatccaactaa
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