Alnus glutinosa (common alder): 133871277
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Entry
133871277 CDS
T10577
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133871277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aglu03041
]
133871277
Spliceosome [BR:
aglu03041
]
Common components
Common spliceosomal components
SR proteins
133871277
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
133871277
NCBI-ProteinID:
XP_062164667
LinkDB
All DBs
Position
6:23192990..23197805
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AA seq
256 aa
AA seq
DB search
MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA
FVRYKYADEAQKAVEKLDGKIVDGREIMVQFAKYGPNAERIHKGKISESTSKTKGRSRSR
SPRPRHRDEHRDKDYRRRSRSRSRERSARDRYRGREKDNRRRSRSPSASPDHHKDRGRGR
YEDERRSRSRSYDSASPARRSPNPRRSPSPHRTSSRGESPDARNHKEGSPVPKTVPSHGR
PVDSRSPSPRRSDADE
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcactttgggagatccggccctccagacatcagagacacctactcccttctcgtc
ctcaacatcactttccgaaccaccgcagatgatctcttccctctcttcgacaagtacggc
aaggtcgtcgacgtctttatccctagagaccgaaggaccggagaatcacgaggtttcgct
tttgttcggtataagtatgctgacgaggcacagaaggcggtggaaaagctagacggaaaa
attgtcgacggcagagagattatggttcagttcgccaagtatggcccaaatgccgagcga
attcacaaagggaagatatcagagtcaacttcgaagacaaaaggcaggtctagaagtcgt
agccctcgtcctaggcatcgggatgaacatagggacaaggattacagaaggagaagtcgt
agtagaagcagggagcgatccgctcgggacaggtaccgtgggagggaaaaagataatcgt
cgccggagcaggagccctagtgcaagtccggatcatcacaaagatcgtgggagaggcaga
tatgaagatgaacgacggagtcggagccggtcctatgatagtgcctcccctgctcggcgc
agtccgaatcctaggaggagcccgtctccacataggacatcttctaggggtgaaagtcct
gatgcacgcaatcataaagaaggctctcctgtgccgaaaactgttccatctcatggtcga
cctgttgattctcgaagcccatctccacgtagatctgatgctgacgaatga
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