Alnus glutinosa (common alder): 133871790
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Entry
133871790 CDS
T10577
Name
(RefSeq) RING-H2 finger protein ATL43
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aglu04121
]
133871790
Enzymes [BR:
aglu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133871790
Ubiquitin system [BR:
aglu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133871790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf_RING_Vps8_fungal
Prok-RING_4
zf-RING_16
DUF7129
ALK_LTK_GRD
FANCL_C
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
133871790
NCBI-ProteinID:
XP_062165191
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All DBs
Position
6:complement(20275419..20277390)
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AA seq
443 aa
AA seq
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MGVFFYWNPFNLVSLLFLLLLLITLSLFIGPSCIAADDVVNGARNPSSSPPPPPPPPKPT
SFSPFRPSIAVIVAVLTTMFSVTFLLLLYAKHCKRGHVVVIGHEPPSSAVRKNSGIDRTI
IESLPVFRFGSLRGLKDGLECAVCLARFESTEVLRLLPKCKHAFHVECVDTWLDAHSTCP
LCRYRVDPEDVLLIDDAKILPETHPVPPPENNDVVVINVDGANPEIRRVSGRHSSAGERG
TGFLQFVLQRTGEPGSHDPTSFRRSLDSAGLRKKSESVAVGCFDRPRKDGLLLTDDRTCL
ERTRFEHRIIVSPGTGGFHQRWSDVQPSDLLYLQSEKIMSDSRRFSSSASGSRPRQQHSS
SIIGGSGWWGGRGVINARSVSEITGLSRFPNTNTNNNNRASACSNRSHDDSRRAGVVSRW
LAWISQTRPAPAVRSGRTTGIAA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcttcttctactggaaccccttcaaccttgtctccctcctcttcctcctcctc
ctcctcatcactctctctctcttcattggcccttcttgtattgctgcagacgacgtcgtt
aatggggcaagaaacccatcttcctccccaccgccaccgcctcctccacccaaaccaaca
agtttctcgccgtttcggcctagcatagcggtcatagtcgccgtcttgaccaccatgttc
tccgtcacctttctcctcctcctctacgccaagcactgcaagcgtggacacgtcgtcgtc
atcggccacgaacctccttcctccgccgtcaggaagaattcgggtatcgaccggaccatt
atcgagtccttacccgtcttccgattcggatctctccggggcctaaaggatgggctcgag
tgcgccgtttgtctcgctaggttcgagtccacggaggtcctcaggctgctccccaaatgc
aagcacgccttccatgttgaatgcgtcgacacctggctcgacgcccactccacttgcccg
ctctgccggtaccgggtcgacccggaagatgtgcttcttattgacgacgccaaaatctta
cccgaaacccaccctgttccgcccccggagaacaacgacgtcgtcgttatcaacgtcgac
ggggcgaatccggaaattcggcgggtttccggtcggcactcttccgccggtgagagaggg
accgggttcttgcagttcgtgttgcagagaacaggcgagcccggttctcacgatccgacg
tcgttcaggagatcactcgacagtgcgggcttaagaaagaagagcgagtccgtggccgtc
ggatgctttgaccgtccccgaaaggacgggctcttgttgacggacgacaggacgtgcttg
gagcgtacaaggttcgagcaccggatcattgtctccccaggaacaggtgggttccaccaa
agatggagcgacgtgcagccgtccgatctgctgtatctacaatcagaaaagataatgagc
gacagccgtagattctcgtcgtcagcatcgggatctcggcctcggcagcagcacagcagc
agtattattggcgggagcgggtggtggggtggcagaggcgtaataaacgcaagaagcgtg
tcggaaatcacgggcttaagcaggttcccaaacaccaacaccaacaacaacaacagagcg
tcagcgtgtagtaatcggagccatgatgattcccgacgggccggggttgtatcgaggtgg
ttggcgtggatttcgcagacacggccagcgccagctgtacggtcgggacgtaccactgga
attgcagcttag
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