Alnus glutinosa (common alder): 133871796 Help Entry 133871796         CDS       T10577                                  Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism aglu  Alnus glutinosa (common alder) Pathway aglu03440   Homologous recombination aglu03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:aglu00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     133871796    03450 Non-homologous end-joining     133871796  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:aglu03032]     133871796    03400 DNA repair and recombination proteins [BR:aglu03400]     133871796 DNA replication proteins [BR:aglu03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     133871796 DNA repair and recombination proteins [BR:aglu03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      133871796     BRCA1-C complex      133871796    NHEJ (non-homologous end-joining)     MRX complex      133871796 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 SMC_N AAA_15 AAA_21 Rad50_zn_hook SbcC_Walker_B AAA_29 OVT1 ABC_tran AAA_16 Motif Other DBs NCBI-GeneID:  133871796 NCBI-ProteinID:  XP_062165203 LinkDB All DBs Position 1:complement(10351369..10371656) Genome browser AA seq 1316 aa AA seqDB search MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR SGHSFIHDPKVAGETETKGQIKLRFKTAVGKDVVCIRSFQLTQKASKMEYKAIESVLQTI NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVVFVHQDEANWPLQDPSTLKKKFDDI FSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIAQDQEKTESLNV QMQELEESIQNVDAKIHHTETMLKDLRKLQDQISTKTAERSTLFKEQQKQYAALAEENED TDEELKEWKTKFEERIALLESKISKLEREMNDTETKSSFLKKTINEYIWEISKLQTEAEA HMSLKNERDSTVQKLYARHNLGSLPNTPFSDEGALSLINRTKSRLMDLEKDMEDKKKSNE YELKTAWDRYMDANDRWKNIEAQKQAKLDIKSGILKRIEEKENERDSFELQISNVNLSHI DEREKNMRIEVERKTNQLAEREFESNIRQKQSELYSIEQKIKAVNREKDIMAADSEDRVK LSLKKAELENHKKKHKKIIDEYKDRIRGVLKGRLPPDKDLKKEITQALRAIGMEFDDLNT KSREAEKEVNMLQIKIQEVNTNLSKYSKDMESRKRFIESKLQSLDQQSLSIDIYLRVLES AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDDFVKKQRVKAAS SAEHMKVLAVESSNADSYFQQLDKLRMVYEEYLKIGKETIPNAEKDLLELTEELDQKTQA LDDVLGVLAQVKADKDSVEVLVQPVETADRFFQEIQNGQKQVDDLEYKLDFRGQGVRTME EIQLELNTLQSTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK AEEELERLTEEKSQVDFDDKHLGEALGPLSKEKDKLLSDYNELKAKLNCEYEEQAEQKRN YQQEVESLLKIASRIKEYYDLKKGDRLKEMQEKQSLSESQLQSCDIRKQEILAELNKSKD LMRNQDQLRRNIEDNLNYRKTKAEVDELTHEIESLEERILKIGGVSTFEAELGKLSQERE RLLSELHRYQGTVAVYQSNVSKNKIDLKQAQYKDIDNRYFNQLIQLKTSEMANKDLDRYY SALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDAEGSGTRSYSYRVLMQT GDTELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNSESLAAALL RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEIFD NT seq 3951 nt NT seq  +upstreamnt  +downstreamnt atgagcaccgtggataagatgctaatcaaaggcatccggagcttcgacccggagaacaag aacgtcatcaccttcttcaagcccttaaccctaatcgtcggccccaacggagctggcaaa accaccatcatagagtgcttgaagctttcgtgcaccggggagctgcctcccaatgcgagg tccggccacagtttcattcacgaccccaaggttgcaggggaaacagagacaaaagggcaa attaagcttcgattcaagacagcggtgggtaaggatgtggtgtgcattaggtcgtttcag ctgacgcagaaggcgtcgaagatggagtataaggcaattgagagtgtgcttcaaacaata aaccctcacactggtgagaaagtttgccttagctatagatgtgctgacatggatcgggag atccccgctttaatgggtgtttcaaaggctattctggaaaatgtggtatttgtacaccaa gatgaagctaattggccattgcaagatccttccacattaaaaaagaagtttgatgatatc ttctctgcaacccgatatacaaaggcattggaggtcataaaaaaacttcacaaggatcag gctcaagaaatcaagacctacaagctcaaattggagaatcttcaaactttgaaagatgct gcatataagcttcgggaaagcattgctcaagatcaagagaaaacagaatctctgaacgta caaatgcaggaattggaggaaagcatccaaaatgtggatgctaaaattcatcatactgaa acaatgctgaaagatttgcggaaactacaggatcagatatcaacaaagactgccgaaaga agcacattgtttaaggagcagcagaaacagtatgctgctcttgctgaggagaatgaagat actgatgaagagttgaaggaatggaaaaccaagtttgaagaaaggattgcacttttggaa tctaaaataagcaagttagagagggaaatgaatgacacagagactaaaagttcttttctt aagaagacaattaatgaatatatctgggagattagcaagctacaaactgaagctgaagct catatgtccttgaagaatgaacgagattccaccgttcaaaaactttatgcaaggcataat ctagggtctcttccaaatacccccttcagtgatgaaggtgctttgagcctcataaatcga accaaatctaggttgatggatcttgagaaggatatggaggataaaaagaaatcaaatgaa tatgaacttaagacagcatgggaccgctatatggatgcaaatgacagatggaaaaatatt gaggcgcaaaaacaggccaaattagatatcaagagtggcattttgaaacgcatagaagag aaggaaaatgaacgggattcatttgaactccaaatttctaatgttaatctttctcacatt gacgaaagagaaaaaaacatgcgtattgaggttgagagaaaaacgaatcagcttgctgaa agagaatttgaatcaaacatacgtcaaaagcagagtgagctatatagcatagagcaaaag attaaggctgttaatcgagagaaagacattatggctgctgattctgaggacagagtgaaa ctgtctctgaagaaggcagagttggagaatcacaagaagaaacacaaaaagataatcgat gagtacaaggacagaattagaggagtcctgaaagggaggcttccacctgataaggatttg aaaaaggaaattactcaggccctaagggccattggaatggagtttgatgacttgaataca aaatcccgtgaagctgagaaggaggtgaatatgttgcaaattaaaatacaagaagttaat actaatctgtccaaatattccaaggatatggagtcaaggaagagatttattgaatccaaa cttcagtccttggatcagcaatctcttagcatagatatttacctccgagtcttggagtca gctaaggagaaaaaagatgtccagaaaagcaaatacaacattgcagatggtatgcggcaa atgtttgatccttttgaaagggttgcccgtgctcatcatgtttgcccttgctgtgagcgc cctttctctgcggaagaggaagatgactttgttaaaaagcaaagagtgaaggcagcaagt tccgctgagcatatgaaagtgttggctgtggagtcctcaaatgctgactcttattttcag cagttggacaagcttcgtatggtttatgaagaatatcttaaaattggaaaggaaacaatt cctaatgctgagaaagatttgcttgagctgactgaagagctggatcaaaagactcaggcc cttgatgatgtgttaggtgttttagctcaagtaaaggctgataaggactcagttgaggtc ttggtgcaacctgttgaaactgctgacaggttcttccaagaaattcaaaatgggcaaaag caagtcgatgatttagagtataagcttgattttcgagggcaaggcgtgagaaccatggaa gaaattcagttagagctgaatacgttgcaaagcacaaaggatggtttgcataatgaactg gagaagttgagggatgagcagaggtatatggaaaatgatttatccaacatccaaattcgg tggcacactctaagggaggagaaagtcaaagcagctaatacattgcgtgatgttaaaaag gcagaagaagagttagagcgtttaactgaggaaaaaagtcaagttgattttgatgataag catttgggggaggctcttggccctttatcaaaggagaaagataaattactgagcgactac aatgaattgaaagctaaacttaattgtgaatatgaggagcaggctgaacaaaaaagaaat taccagcaggaagtcgagagtctacttaaaattgcttctagaattaaagagtattatgat ttaaagaaaggagacaggttgaaagaaatgcaagaaaagcaatctctatcagaatctcaa cttcaaagttgcgacattaggaagcaggaaattttagctgaattaaacaaaagtaaagac ttgatgaggaatcaagatcagttaagacgaaatattgaggacaacttgaattataggaaa acaaaggctgaagtagatgagcttacccatgagattgaatcactggaagaaagaatattg aagatcggtggggtttcaacatttgaagctgaacttggaaagctctcacaggaaagagag agacttctttcagagttacacaggtaccaaggaacggtggctgtctaccaaagtaacgtt tcgaaaaacaaaattgatcttaaacaggcacaatacaaggatattgacaatcggtacttt aatcagctaatccagcttaagacatctgagatggcaaacaaggacctggatagatactac agtgcacttgacaaagcacttatgcgattccacacaatgaaaatggaagaaataaataaa ataataagagagttgtggcaacaaacatacagaggacaagacatagattacattagcatc cattctgatgctgaaggttctgggactcgctcctacagctacagggttcttatgcaaact ggtgatactgagttagaaatgaggggaaggtgtagtgctgggcagaaggtccttgcttcc ttgatcatacggctggctttagccgagactttctgcctcaactgtggtatactagcacta gatgaaccaaccacgaacttggatggcccaaattccgagagtcttgctgcagctcttctg agaattatggaggacagaaagggccaggagaattttcagctgatagtgattactcatgat gagcgttttgcccaactaattggtcaacggcagcacgcagaaaagtattatcgggtcgca aaggacgaccatcagcacagtataattgaagcccaggagatatttgattga

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