KEGG   Alnus glutinosa (common alder): 133871927
Entry
133871927         CDS       T10577                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC24-like isoform X1
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
aglu  Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:aglu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aglu04121]
    133871927
Enzymes [BR:aglu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     133871927
Ubiquitin system [BR:aglu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    133871927
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 zf-C3HC4_4 zf-RING_10 RING_XB3-XBAT31 Prok-RING_4 zf-rbx1 zf-RING_4 zf-RING_6
Other DBs
NCBI-GeneID: 133871927
NCBI-ProteinID: XP_062165381
LinkDB
Position
1:complement(10513029..10517846)
AA seq 223 aa
MILSMSLNGSSECPEGSARGFKGRRMVFDLDLNYPPPEENTALTDPRDAQPRENGYSQRE
TLVNAEFIDEEIVVVSPRKFAEAMSNSQRNRSQRSCGVIDRFHDPAEACSHVSETGACVS
FSSLESVHFNWELYLNMEVSNKIKKSNVPMPPILPHSEPQHERPTFSCAICMGQLIEETS
TKCGHIFCKKCIEVAIAIQHKCPTCRHKLRKRDIFRVYLPTAS
NT seq 672 nt   +upstreamnt  +downstreamnt
atgattcttagcatgagcttaaatggatcaagcgaatgtcccgaagggagtgcaagaggc
ttcaaggggagaaggatggtatttgacttggacctcaattatccacctcctgaggagaac
acagctctaactgatcctcgagatgcacaacctcgagagaatggatactcacaaagagaa
actctagttaatgccgagttcattgatgaagaaattgttgtggtctccccaaggaaattt
gcagaagcaatgagcaattctcaaagaaaccgttctcagagaagctgtggagttatagac
aggttccatgatcctgcagaagcatgcagtcatgtttcagagacaggtgcatgtgtcagc
ttctccagtcttgagtctgtgcattttaactgggaactttacctgaacatggaagtcagt
aacaaaatcaagaaaagtaatgttcccatgcctccaattctgcctcattctgaaccccag
catgaaagacctaccttcagttgtgcgatctgcatgggccagttgattgaagagacatca
acgaaatgtggtcacatcttctgtaagaagtgcattgaggtggcaatagctattcagcac
aaatgccctacttgcaggcataaacttagaaagcgagacatcttcagggtctaccttcca
actgccagttaa

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