Alnus glutinosa (common alder): 133871960
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Entry
133871960 CDS
T10577
Name
(RefSeq) histone deacetylase 19-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03082
ATP-dependent chromatin remodeling
aglu03083
Polycomb repressive complex
Brite
Enzymes [BR:
aglu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
133871960
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
133871960
HDAC complexes
Sin3A-HDAC complex
133871960
BRAF-HDAC complex
133871960
REST complex
133871960
SHIP complex
133871960
MiDAC complex
133871960
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
133871960
Heterochromatin formation proteins
Other heterochromatin formation proteins
133871960
Chromatin remodeling factors
NuRD complex
133871960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133871960
NCBI-ProteinID:
XP_062165425
LinkDB
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Position
6:30366629..30373526
Genome browser
AA seq
474 aa
AA seq
DB search
MESGGNSLTSGPDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VLKPTPARDRDLCKFHADDYVNFLRAITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVAGALKLNQGGCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYGKGKYYSLNVPLDDGI
DDESYQSLFKPIIGKVMEVFRPGAVILQCGADSLSGDRLGCFNLSIKGHAECLRFMRSFN
VPLLLVGGGGYTIRNVARCWCYETGVALGIELDDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRQLLEEIRAKLLDNLSKLQHAPSVQFQDRPPDTELPEADEDQNDGDKRWEPDSDMES
DDDRKPLPSRVKREYIEPECKDPVSNMMAIDEPCIKVEQNDSNKPSEQHTEMNL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcggaggcaattcccttacatctgggccagatggggtgaagagaaaagtttcc
tatttctatgaccctgaggttgggaattattattatggacagggtcacccgatgaagcca
cataggattcgaatgacacatgctctcttagcccactatggattgcttcaacatatgcag
gtcctgaagcccactcctgccagagatagggatctttgcaagttccatgctgatgattat
gtcaactttctgagggccataaccccggaaacacagcaagatcaactgaggcagctgaag
aggtttaacgttggggaagactgccccgtatttgatggtctttactcattctgtcagact
tatgccgggggttcagttgctggtgctctcaaattgaaccaaggaggttgtgatattgca
attaactgggctggtgggctgcaccatgccaaaaagtgtgaggcttctggattttgctac
gtgaacgatattgtattggcaattctagagcttctcaaagtacatgagcgtgttttatat
gtggacattgatatccaccatggcgacggtgtagaggaggctttttacacaactgataga
gtcatgactgtttcatttcataaatttggagattatttccctggtacaggtgatgttcgt
gacattggatatggtaaagggaagtactattctctcaatgtaccccttgatgatggtatt
gatgatgagagctaccaatcattgtttaagccaataatagggaaagtgatggaagttttc
aggcctggtgctgtgatcctacagtgtggtgcagactctttgtcaggtgatagattaggg
tgtttcaatctatctattaagggtcacgcagagtgtcttagatttatgagatctttcaat
gttcctcttctattggtgggtggaggtggttatacaatacgaaatgtcgctcgttgctgg
tgttatgagacgggtgttgcacttgggatcgaacttgatgataagatgccacaacatgaa
tattatgagtactttggtccagactatactcttcatgtggctccaagtaacatggaaaat
aaaaactctcgccagctattggaagagataagagcaaaacttcttgataatctatcaaag
ctgcaacatgctccaagtgtccagttccaagaccgaccacctgatacagagcttccagag
gcggatgaagatcaaaatgatggagataaaagatgggaacctgattctgacatggagtct
gatgatgaccgtaagcctttgccaagtcgagtgaagagagaatatatcgaacccgaatgt
aaagatccagtatcaaatatgatggcaatagatgagccatgcatcaaagtggagcagaat
gactcaaacaaaccatctgaacaacatactgagatgaacttataa
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integrated database retrieval system
