Alnus glutinosa (common alder): 133871972
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Entry
133871972 CDS
T10577
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133871972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aglu03021
]
133871972
03036 Chromosome and associated proteins [BR:
aglu03036
]
133871972
Transcription machinery [BR:
aglu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133871972
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133871972
PBAF complex
133871972
GBAF(ncBAF) complex
133871972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_1
Myb_DNA-bind_7
DUF7018
PTHB1_hp
Motif
Other DBs
NCBI-GeneID:
133871972
NCBI-ProteinID:
XP_062165448
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All DBs
Position
6:complement(30058479..30062453)
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AA seq
500 aa
AA seq
DB search
MATTSPAKEPTETPSKPPPLISQSPITPPPVKPETPTTTTPTTTTTTTSTPRPPDPPPSD
ADVIQVPSYSRWFSWSKIHDCEVRFVPEFFDSASHSKNPRLYMYYRNSIVKQFRANPSRK
LTFTDARKTLVGDVGSIRRVFDFLEAWGLVNYSPSAHNKPLKWEDKESKSDAKGGGGAAA
TVESSAAAAASNRESSNKVVCSGCKLVCSIACFACDKYDLTLCARCYVRGNYRVGVNSSD
FRRVEISEDMKADWTEKETLYLLEAIMHYGDDWKRVAQLVGGRSEKECVAQFMKLPFGEQ
YLKYPNSGEVDNKYNAMKDQVDAGCGLENSGASFPSKRMCLTPLADASNPIMAQAAFLST
LAGVNVAEAAARAAVMSLSQVGHGANREHLGTLARNTKLQETEVASNGDTTQGSLDGAFV
EANSQIQKEQLDVERAISEITQQMKAIQNKLVHFEDLDLRMEKEWQQLEQMKNMLFVDQL
ALLFHRSSEERMEQKNIRTD
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacttcaccagccaaagaacccactgaaaccccatccaaaccgccacccctt
atctcccagagccccatcacccccccgcccgtcaagcccgagactcccaccaccacaact
cccaccaccaccaccaccaccacctccactcctaggcctcctgatccaccgccttccgat
gccgacgtcatccaagtccccagctactcccgttggttctcatggagcaaaatccacgac
tgcgaggtccggttcgtcccggagttcttcgactctgcctctcactccaagaaccccagg
ttgtacatgtactacaggaactccatcgtcaagcagttcagggccaacccttcgagaaag
ctcacttttacggacgcaagaaagaccctggtaggcgacgtgggttccatccgcagggtc
ttcgatttcctggaggcctggggtctggtcaactactcgccctccgcgcacaacaagcca
ctcaagtgggaagacaaggagagtaagtcggacgccaaaggcggcggcggagctgctgcg
acggttgagtcttccgccgcggcggcggcttccaatagagagagttctaacaaggtggtg
tgcagtgggtgcaagctcgtttgcagtattgcttgctttgcttgtgataagtatgacttg
actctctgtgcaagatgctatgttcgtgggaactaccgggttggtgtcaactcttcagat
ttcaggcgggttgagatcagtgaagatatgaaggcagattggacagaaaaagaaactttg
tatcttctagaagctattatgcattatggtgatgactggaagagggttgcacaacttgtt
ggtggaagaagcgagaaggaatgtgtcgctcagttcatgaagcttccttttggggagcaa
tatcttaaatatccaaactctggggaggttgataacaagtataatgcaatgaaggatcaa
gttgatgctggatgtggtttagaaaactctggtgcatcattccccagtaaaagaatgtgt
ctcacacctcttgcagatgcaagcaacccaattatggctcaggctgcatttctttcaact
ctggctggtgtaaacgttgcagaagctgctgcccgagcagcggttatgagtctctctcag
gtgggccatggagcaaatagagagcatcttggtactcttgccaggaatacaaaattgcaa
gaaactgaggttgcatccaatggcgacaccacccagggttcattggatggagcttttgta
gaagcgaattcacagattcagaaggaacagctagatgtggagagagcaatttctgagatt
acacagcagatgaaagcgatacaaaataagcttgttcattttgaggatctagatttgcgg
atggagaaagaatggcaacaattggagcaaatgaagaacatgctctttgtcgatcagctt
gccctcttgtttcatagaagttctgaagaacgaatggaacaaaagaatataagaacagat
tga
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