Alnus glutinosa (common alder): 133872230
Help
Entry
133872230 CDS
T10577
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03440
Homologous recombination
aglu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133872230
03460 Fanconi anemia pathway
133872230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aglu04121
]
133872230
03036 Chromosome and associated proteins [BR:
aglu03036
]
133872230
03400 DNA repair and recombination proteins [BR:
aglu03400
]
133872230
Ubiquitin system [BR:
aglu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
133872230
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
133872230
DNA repair and recombination proteins [BR:
aglu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
133872230
FA (Fanconi anemia) pathway
Downstream FA components
133872230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
133872230
NCBI-ProteinID:
XP_062165662
LinkDB
All DBs
Position
7:complement(28653337..28660699)
Genome browser
AA seq
1116 aa
AA seq
DB search
MSTWEIFSNADNGVQWEISDRDLQIKPDDENFDSPNGSSRLPSMSDLVLQGCSKLLENRD
EGVGVSPLFRTGLGKPVGVKQSSIAKALSILGDDTGQVLARDNGCGSSNSLFQTGSGKIV
NISSDGLVRAKTLLGLEEDNDNSIFQGLQHSVKPYNPNGPFGWKSLSNSEMGDCVNNCDI
KDGTSVPRPLLTSMSGSAGSRLKNQANPNLMQPEMQSSALKPPPIKFHTAGGRSISVSSD
ALKRARSLLGDPELGTFLNEEDADDSVFSFSKETRFNDILSNEGNDPCTPFSSEEMAYNK
NTSKSFVTPLRSSSNQVQLSVKSEHIISGNNLIKEFDAVHYDNVCRLNTNASSLEKRLSD
RQGDPNTAAKNSLANGISSRISPLGRSPARPLVDITNTIGTACTNNGQVANVKRILGKSS
VSPFKKPRSSKFSTPLNKNVPLVPNGLSTLPSEHSCCKKRISTRYPFQIPRMCVNEYFKA
PPLHQNTLELLSDQVRCIKSTNAEKYMFHDESGLNCIGPEAFFHILAQSGASIQYASKEW
VINHYKWIVWKLACYERCYATEAAGKFLTVSNVLEELKYRYEREVNHGHRSAIKRILEGD
ASPSSMMVLCISAICSNCDLKNETSSMEVIGDECSNTTKVELTDGWYAMDAVLDVPLSKH
LVAGKLFVGQKLRIWGAGLCGWVGPVSSLEVSRTVSLLLHGNGTYRAHWADRLGFCKGVC
SPLAFRCIKCNGGPVPRTLVGVSRIYPVLYKERLGNEGSIVRSERMESKMVQLYNQRRST
VVEGIISEFQRDIKGSHNYDDNDSEGAKLLKILETAAEPEVLMAEMSPEQLTSFTTYQAK
LEANRQANMDKAIEKAFKDAGLGEREVTPFMRVRIVGLTKKMGHGKDIPKEGLITIWNPT
EKQQHELVEGQAYAISGLVPFNSDADTLYLQARGSTTKWQPLSSQATEHFKPFHNPRKPV
LLSNLGEVPLSSEFDVAAVIVHVGEVFTAPHQKKQWVFVTDGSISESQPEELSNSLLAIS
FCTPYINDGSFAPINSNLVGSTVGFCNLIKRAKDQLNHLWVAEATENSIYFLNFDPSHCA
HLKNAAAFAQRWAKISSLSIDKLREKVLFIIGDCKS
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgtgggagatattctccaacgccgacaacggtgtccagtgggaaatctccgat
cgagacctccaaatcaagcccgacgacgaaaattttgattcaccaaacggcagctctcgt
ctaccttccatgtccgatcttgttctccaagggtgttcgaagcttctggagaatcgcgac
gaaggcgttggggtttctccgttgttccgaactgggttgggaaaaccggttggggtgaag
cagtcttcgatagccaaggcattatctattctcggcgacgatacaggccaagtgctagct
agagataatggatgtggttcctcaaattctctcttccagacgggctctgggaaaattgtc
aatatatcttcagacggtctggttagagctaaaacattgttgggattggaagaagataat
gataatagtatttttcaaggtcttcaacattcagtgaagccgtataatcccaatggacca
tttggatggaaaagtctatccaattcagaaatgggagactgtgtgaacaattgtgatatt
aaggatggtacatcagttccgaggcctttgttaacttccatgtcaggttcagcaggaagc
cgattgaagaatcaggcaaatccaaacctgatgcaacctgaaatgcagagttcagctctt
aaaccacctccaatcaagttccacacggcaggtggaagatctatttctgtctccagtgat
gcactgaaacgtgctaggagccttcttggtgacccggaattgggaactttcttgaatgaa
gaggatgcagatgattcagttttttcattttcaaaggagacaagattcaatgatattttg
tcaaatgagggaaatgatccttgcactcccttttctagtgaggaaatggcatacaacaaa
aatacgtcaaaaagttttgtaaccccgttgcgatcatcttctaatcaagtgcagttgtca
gtcaagtcagaacatattatttcagggaataacttgatcaaagaatttgatgctgttcat
tatgacaatgtttgtaggttaaatactaatgcatcttctctagagaagcgtttaagtgac
aggcaaggtgatcctaatacagcagcaaaaaattctttggctaatggtatcagttcaagg
attagtccacttggacggtcaccagccagaccattggttgatattacaaataccattggc
acagcttgcacaaataatggacaagtggctaatgtaaagagaatacttggaaagagttct
gtttctccgttcaaaaagccccgcagttccaaattctccaccccgttgaataagaatgtt
ccactagttcctaatggtttatctactttaccatctgaacactcatgttgcaaaaaaaga
atttccacacgatacccgtttcagattccaagaatgtgtgtcaatgaatattttaaagca
cctccattacaccagaatacgttggagcttttgtcagaccaggtcagatgcattaaatca
accaatgcagagaagtacatgtttcatgacgagtctggcttaaattgcattggaccagaa
gcttttttccacatattggctcaatctggagcatccatacaatatgcttcaaaagagtgg
gtcataaatcactacaagtggattgtttggaaactagcatgctatgagagatgctatgcc
actgaagctgctggaaaatttttgacagtgtccaacgtgctcgaggaattgaagtataga
tatgaaagagaagtcaatcatggccatcgttctgcaatcaagagaattctggaaggggat
gcatcaccttcttcaatgatggttctatgcatttcagctatttgttcaaattgtgaccta
aagaatgagacttcttccatggaagtaattggggatgaatgtagtaacacaacaaaagtt
gaactaactgacgggtggtatgcaatggatgctgttttggatgtaccactgtcgaagcac
cttgttgctggaaaactgtttgtgggacagaaacttcggatctggggagcaggattatgt
ggctgggttgggcctgtttcatcccttgaggtgtcaaggacagttagtttgctattgcat
ggaaatgggacatatagagctcactgggctgatagactgggattctgtaaaggtgtttgt
tctcctttagcatttaggtgcattaagtgtaatgggggtccagtcccccggactttagta
ggagtcagtcggatataccctgtcctctataaagaaaggttaggtaatgaagggtctatt
gtgagatcagagaggatggagagtaaaatggtgcaattgtacaatcaaaggcgatctact
gttgtagagggcatcatttccgagtttcaaagagacataaaaggttcacataattatgat
gacaatgacagtgaaggagcaaaacttttaaagatacttgagacagctgcagaacctgaa
gtattaatggcagagatgagtccggagcaactaacttcttttaccacttatcaagcaaaa
ctagaggcaaacaggcaggcaaacatggacaaagcaattgagaaagcttttaaagatgct
ggcttaggtgagagagaagtcaccccatttatgagggtgaggatagttggattaactaag
aaaatgggtcatggaaaggacatccctaaagaaggcttgataacaatctggaacccaaca
gagaagcagcaacatgagctggttgaggggcaggcttatgctatttctggacttgtaccg
tttaattctgatgcagataccctatatttgcaagcaagaggatccactaccaaatggcag
cctttatcttcccaagcaaccgaacactttaagccgttccacaatcctcgcaaaccagta
ttgttgtcaaatttgggtgaagttcctctttccagtgagtttgatgtagctgcggtcatt
gtgcatgtgggggaggtttttacagctcctcaccaaaagaaacagtgggtgtttgtgaca
gatggctccatttctgagtcacagccagaagaattatccaattctttacttgccatcagc
ttctgcactccatatattaatgatggttcgtttgcaccaatcaactctaatctcgtggga
tccactgttggcttttgtaatcttatcaagagagcgaaggaccaattgaatcatctttgg
gtagcagaagctacagagaattcaatctactttctgaattttgatccttcccattgtgct
cacctaaaaaatgcagctgcctttgctcaaagatgggcaaagatctctagcttgagtatt
gataagcttagggagaaagttttatttattattggtgattgtaaaagctag
DBGET
integrated database retrieval system
