Alnus glutinosa (common alder): 133872479
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Entry
133872479 CDS
T10577
Name
(RefSeq) chromatin-remodeling ATPase INO80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133872479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aglu03036
]
133872479
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
133872479
INO80 complex (yeast)
133872479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
133872479
NCBI-ProteinID:
XP_062165972
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All DBs
Position
7:5123545..5136734
Genome browser
AA seq
1535 aa
AA seq
DB search
MDSRRQSKDSLSYSNLFNLESLMNFQLPQQGDDFDYYGNSSQDESRGSQGGAVGKHGNGT
MRERELSLLKKRRQSENSDDEDEDSYNGRRITEERYRSMLGEHIQKYKRRLKDSSATPAP
TRMGIPVPKSNLSLKARKLGNEHQGGFQEVETMPDWFNDSNPQKQGMHREADFAPLNGSE
RTTYEPAFLDIGDGITYKIPPTYDKLAAALNLPSFSDIEVEEFYLKGTLDLGSLAAMMAS
NKRFGPRSRAGMGEPQPQWESLHARLKALSASKSPQMFGLKISDIGLNSSIPEGAAGNIK
RSILSEGGVLQVYYVKVLEKGDTYEIIERALPKKPKIKKDPSVIEEEEKEKIGKIWVNIV
RRDIPKHHRVFTAFHRKQLIDAKRFSENCQREVKMKVSRSLKLMRGAAIRTRKLARDMLL
YWKRVDKEMAEIRKREEREAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNKSNS
QPSEALPVGDEKLNDQEVLLSSSDAEPDEEEDPEEAELKKEALRAAQDAVSKQKKLTSAF
DSECLRLRQAAEFEGLPPEVAGASNIDLHNPSTMPVTSTVQTPRMFKGFLKEYQLKGLQW
LVNCYEQGLNGILADEMGLGKTIQAMAFLGHLAEEKNIWGPFLVVAPASVLNNWNDEVNR
FCPDLKTLPYWGGLQDRTILRKRIKPKDLYRREAGFHILITSYQLLVSDEKYFRRVKWQY
MVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQ
FNEWFSKGIESHAEHGGTLNEHQLNRLHSILKPFMLRRVKSDVISELTSKTEVTVHCKLS
SRQQAFYQAIKNKISLAELFDSNRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGSTY
LHFGDVPNSLLPAPFGELEDVHYAGGHNPIIYKIPKLIHQEIVHSSETLCSAVGRGVCRE
SYQKHFNMFSPENVYRSIFLQEDNSDGLSVGSRTFGFTRLMDLSPSEVTFLAAGSFMERL
LFSVPRWDRQFLDGILDSLMEAMDDDTECSYLERGKVRAVTRMLLMPSRSETNLLRSKCA
TGPGDAPFEALVVPHQDRILSNIRLLHSAYKFIPRIRAPPIGARCSDRNFTYKMTEELHD
PWLKRLFIGFARTSECNGPRKPHRPPHHLIQEIDSELPASQPALHLTYKIFGSSPPMQSF
DPAKLLTDSGKLQTLDILLKRLRPENHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSS
TITDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAH
RLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLVMTGGHVQGDLLAPEDVVSLLLDD
AQLEQKLREIPSQAKDRQKKRQSTKGIRVDAEGDASLEDLTNAGSQGTGNEPPADLEKAK
SSSKKRKAAPDKQAPPKQRNPQKMASPMDYELDDSLQNSDSQAQRPKRPKRPTKSVNENL
EPAYTGTLAASPEQAHYLPLTELGSAGFGAEALDS
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggacagcaggaggcaatccaaggactcgctctcctactccaatctcttcaatcttgag
tctttgatgaactttcaacttccacaacaaggtgatgattttgattattatgggaatagt
agtcaggatgagagcagaggtagccaaggtggagcggttgggaaacatggtaatgggact
atgcgtgaaagggaactgagtttgttaaagaaaaggaggcagtctgaaaacagtgacgac
gaggacgaggacagttataacgggagacgcattactgaggagaggtatcgatcaatgctt
ggagaacacatacaaaagtataagaggaggctcaaggattcctcagcaactcctgcacca
accaggatggggattccagttccaaagagtaatttgagtttgaaagctaggaaactgggg
aatgagcaccaaggaggatttcaggaagtggaaaccatgcccgactggttcaatgatagt
aatcctcaaaaacaagggatgcatcgtgaagcagattttgcaccactcaatggcagtgaa
agaacaacatatgaacccgcttttttagatattggggatggtatcacatataagattcct
ccaacttatgataagctagcagcagcactgaacttgccaagcttctcagatattgaggtg
gaggaattttacttaaagggtacattggatttggggtccctagcggcaatgatggcaagt
aataaaaggtttggtcctagaagccgggcaggaatgggagagcctcagccccagtgggaa
tcgcttcatgcgagattgaaggccttgtcagcatctaaatcaccccagatgttcggtcta
aaaatatctgatattgggttgaattcctccatcccagagggggcagctggaaacataaag
cgatctattttgtctgagggtggtgttttgcaggtttactatgtgaaggttttggagaaa
ggagacacatatgagatcattgaacgggctctacccaagaaaccaaagataaaaaaagac
ccttctgtgattgaggaggaggaaaaggagaagattggaaaaatttgggtaaacattgta
agaagagacataccaaagcatcatagagtttttacagcctttcatcgaaagcaactaatt
gatgccaagcggttctcagagaactgtcaaagagaggtgaaaatgaaggtgagtagatca
cttaaattgatgaggggtgctgcaatccgcacaaggaaattagctagagacatgctgcta
tattggaagcgagtggataaagagatggcagaaataagaaaaagagaggagagagaagct
gctgaagctttgaggcgtgaacaggagcttcgggaagcaaagagacaacagcagaggctc
aattttcttatacaacaaacagaactttacagtcattttatgcaaaacaagtcaaattca
cagccctctgaagctttgcctgtcggagatgaaaaattaaatgatcaagaagtgcttctg
agctcttcagatgctgagcctgatgaggaagaagatcctgaggaggctgaattgaagaag
gaggccttgagagctgctcaagatgcagtttctaagcagaaaaagttaacaagtgcattt
gatagtgaatgtttgaggctgcgacaggctgctgaatttgagggccttccacctgaggtt
gcaggagctagtaacatagatctacataacccttccaccatgcctgtaacatcaacagtt
cagacaccccggatgtttaaaggtttccttaaagagtatcagctaaaaggccttcagtgg
ctggttaattgttacgagcagggtttaaatggcatacttgctgatgagatgggccttgga
aagaccatccaggccatggcatttttgggtcatttggctgaagagaaaaatatatggggt
ccttttttggttgttgcacctgcttctgtattgaacaactggaatgatgaagttaatcgt
ttctgccctgacttgaaaactcttccatattggggtgggcttcaagatcgaaccatactt
agaaaaaggatcaaacccaaggatctgtaccgcagggaagctggatttcacattctcatt
accagctaccagctgctagtgtctgatgagaagtattttcggcgtgtgaaatggcaatac
atggtgttagatgaagcccaggcaattaaaagttcgaacagtataagatggaagacactg
ctcagcttcaattgtcggaaccgcttgctgctgactggtacacctatccagaataatatg
gcagagttgtgggcccttttacatttcattatgccgaccttatttgacagccatgaacag
ttcaatgagtggttttcaaaaggaattgagagccacgcagagcatgggggtactttgaac
gagcaccagcttaacagattgcattcaattttaaaaccttttatgctgcgaagagttaaa
tcagatgtgatttctgagctgaccagtaaaactgaggttacagtgcattgcaagttgagt
tctcgacaacaagccttttatcaggctattaagaacaagatatctcttgctgagttgttt
gacagcaatcgtgggcatcttaatgagaagaaaattctgaatttaatgaatattgtcatt
cagctgagaaaggtgtgtaatcatccagagttgtttgagaggaatgagggaagcacatac
ctccactttggggatgtcccaaattctcttctgcctgctccctttggggaattggaggac
gtacactatgcaggaggtcacaatcctataatatataagataccaaaactaattcatcaa
gaaattgtccatagttctgaaactctttgctcagcagttggacgtggtgtctgcagagaa
tcttatcagaaacacttcaatatgttctccccagaaaatgtttatcgatctatattcctg
caagaggataattcagatggattatctgtgggaagtagaacttttggttttacacgtttg
atggatctatccccatcagaggttacatttctggctgctggttcttttatggagcgactg
ctgttttctgtaccgagatgggaccgacaattcctggatggaattttagactcactcatg
gaagccatggatgatgacactgaatgcagttaccttgagagggggaaagtaagagctgtt
acgcggatgttactgatgccatcaagatctgagactaacttacttcgaagcaaatgtgca
acggggcctggagatgctccatttgaggctttagttgtccctcatcaggacaggattcta
tccaatattaggcttcttcactcagcatacaaatttatcccacgaattagagctcctcct
attggtgcccgctgctcagatagaaacttcacttacaaaatgactgaagaactacatgac
ccctggctaaagaggttgtttattgggtttgcacgcacgtctgaatgtaatggacccaga
aagccacatcgtcctcctcatcatttaattcaagagattgattctgaactaccagcttca
cagcctgctcttcacttgacatacaagatttttgggtcttctccgccaatgcaaagcttt
gacccagcgaagttgctcacagactctggaaagcttcaaacacttgatatattattgaaa
cgtttgcggccagaaaatcaccgtgttctcttgtttgcccaaatgacgaagatgctgaat
attctggaggattacatgaactataggaaatataaatatcttagacttgatggatcctcc
actataactgatcggcgagacatggtcagagacttccagcatcggagtgatatttttgtg
tttttgttgagtacaagagctggtgggctgggaattaacttgacagctgctgatactgtc
atattttatgaaagcgattggaatccaactttggatttacaagcaatggatagagctcac
cgcttgggtcagacaaaagatgttactgtctaccgacttatttgtaaagagacagttgaa
gagaagattcttcagagagcaagtcagaaaagtactgtgcagcagcttgttatgacgggt
ggtcatgttcagggtgatctcttggcccctgaagatgttgtgtctttacttctggatgat
gcccagttggagcagaaattgagagaaattccatcacaggctaaggatagacaaaagaaa
agacaatcgacaaagggtatacgggtagatgcagaaggcgatgcatctttggaagatcta
acaaacgctggatctcagggtacaggaaatgagccgcctgctgatctggagaaagcaaaa
tctagtagcaaaaagaggaaggctgctcctgacaaacaggctcccccaaagcaaaggaat
cctcaaaagatggcttcaccgatggactacgagttggacgattcccttcaaaattctgat
tcacaagcacaaaggccgaagaggccaaagaggccaacgaagagtgtaaatgaaaatctt
gaaccggcatataccggcaccctcgcagcttctccggagcaggcacattatcttcctctg
actgagttaggctctgctggttttggagcagaagcacttgatagttga
DBGET
integrated database retrieval system
