Alnus glutinosa (common alder): 133872659
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Entry
133872659 CDS
T10577
Name
(RefSeq) general negative regulator of transcription subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133872659
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
133872659
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Gene cluster
GFIT
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NCBI-GeneID:
133872659
NCBI-ProteinID:
XP_062166222
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Position
7:164267..186359
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AA seq
900 aa
AA seq
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MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVSELESQIDSFEAEVEGLTVKKGKTRPPRLTHLEASITRHKA
HIMKLELILRLLDNDELSPEQVNDVREFLEDYVDRNQEDFDDFSDVDELYNTLPLDKVES
LEDLVVIGPPSLVKGAPVLSLKTSLVASASQIPATTASNLQQGTVQEQVEDTASQDINSD
TVPRSPPPQNSVIGSSAASTPVASHATANVSAHNLSSVSTSSVSLPVSGSIRVVMENTGP
TNSSSALSLSPSAREEDSLPGRRSSPSLSDAGLVRGIGRGGLSSQPSASIPLSASSVVPG
NGAVGAVPSASDMTKRNILVADERLGSGGMVQPLVSPLSNRMILPQAAKANDGTGAIDSS
NVGEPPAIAGRVFSPPMVPGMQWRPGSAFQNQNEAGQFRGRTEIAPDQREKFLQRLQQVQ
QQGHSTLLSMPPLAGGNHKQFSTQQQNPLLQQFNSQSTSASSQAGLGLGVQASGLNNVTS
ATLQQQNNSIHQQSNQQALMSGGPKDADVGSAKVEEQQQQQQQQQNLPDDSTVDSTTGSG
LGKSLMNEDDLKVSYAIDSPAGVSGSLTEPAQVPRDIDLSPGQPLQSNQPSGSLGVIGRR
SVSDLGAIGDNLSGSTLNSGGMHDQSYNLQMLEAAYYKLPQPKDSERARSYTPRHPAITP
PSYPQVQAPIVNNPAFWERLGLEVNGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHKK
YNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELMV
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgggagccagccgtaagcttcagggagagatcgatcgggttctcaagaaggtccaagaa
ggcgttgatgtcttcgacagtatctggaacaaggtttacgatacggacaatgcgaatcag
aaggagaagttcgaggcggacttgaagaaggagatcaagaaactccagcggtacagggac
caaatcaagacatggatccagtccagcgagatcaaggacaagaaggttagtgcctcttat
gagcaggctttggtggatgctcgcaaacttattgagcgtgaaatggaaagatttaagatc
tgcgaaaaggagacgaagacaaaagcattctctaaagaaggactaggtcaacaacctaaa
actgatccaaaggagaaggctaaatcagagacaagggattggttgaacaatgtggtttca
gagttggagtctcagattgatagctttgaagctgaggttgaggggctaactgttaagaag
ggaaagactaggccgccaagactgacacatttagaggcatctatcacccgccacaaggct
catataatgaagttggaactgatcttgaggctcctggataatgatgaactaagtcctgag
caggttaatgatgttagagagttcttggaagattatgtggaccgaaatcaggaagatttt
gatgattttagtgatgttgatgagctttataacactttaccactagacaaggtggagtct
cttgaagatcttgttgtaattggtcctcccagtcttgttaagggggcacctgttcttagc
ttgaagacatctttggtggcatcagcctctcaaattcctgccaccactgcttctaatctt
cagcagggtactgtccaggagcaagttgaagatacagcttcccaggacatcaattctgat
actgttccaagatcgccacctccccaaaatagtgtaattggttcttctgcagcatcaaca
ccagttgcgagtcatgcgaccgctaatgtttctgcccataatttgtctagtgtctccact
tcttcagtgagccttccagtttcaggttctattcgagttgtcatggagaacactggtcct
acaaattcttcttcggctttgagtctgtccccttctgcaagggaagaagatagtcttcct
ggccgcagatcatctccatctctttctgatgctggacttgtgaggggaattggtagaggt
ggcctctccagccaaccatcagctagtatccctcttagtgctagcagtgtagttcctggc
aatggagctgttggtgcagttccttcagcctcagacatgacgaagagaaacattttagta
gccgatgagagacttgggagtggtggcatggtgcagcctctggtttcccctctaagtaat
agaatgattttgcctcaggctgccaaggcaaatgatggaactggtgcgattgattctagt
aatgttggtgagcctccagctatagctggcagagttttttcccctcctatggtccctggt
atgcaatggaggcccggaagtgcctttcagaaccagaatgaagcggggcagtttcgtgga
agaactgaaattgcacctgatcagagagagaagtttttgcaacggctccaacaagtgcag
caacaaggtcacagcacccttctgagcatgccacctcttgctggaggaaatcataagcag
ttttctacacaacagcaaaaccccctattgcagcagtttaattctcaaagcacatctgcc
tcttctcaagctggtctgggacttggagtccaggcatctggtctcaataatgttacttct
gccaccttacagcagcaaaataattccatccatcaacagtctaatcaacaggcgttgatg
tcaggtggtccaaaagatgctgatgttggctctgcaaaagttgaggagcagcagcagcag
cagcagcaacaacagaatttacctgatgactcaactgttgactctacaactggttctggg
cttggaaagagtctcatgaatgaggatgatttgaaagtctcttatgccatagatagtcct
gcaggagtatctggctctttgactgagcctgctcaagtccctagagatattgatctctct
cctgggcaacctttacaatcaaatcaaccttctgggagccttggtgttattggccgaaga
agtgtttctgaccttggtgccattggagataacctcagtggatcaactctgaattctggg
ggaatgcatgatcagtcatacaatttgcagatgcttgaggctgcttattataaacttcct
caacccaaagattctgaacgtgcaagaagttatactccaaggcaccctgcaattactcct
cctagctatcctcaagtacaggcacctattgttaataatcctgccttctgggaacgacta
ggtctggaagttaatgggactgacactctcttctttgcattttactatcagcagaacact
taccagcaatatttggctgcaaaagagttgaagaagcaatcttggagataccacaagaaa
tacaatacatggtttcaacggcatgaggagcctaaagttgccacagatgaatatgaacag
gggacatatgtgtacttcgattttcatattgccaatgatgacctgcagcatggatggtgc
cagagaatcaaaacagaattcacttttgagtacaactatcttgaagatgaacttatggta
tag
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