Alnus glutinosa (common alder): 133872786
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Entry
133872786 CDS
T10577
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aglu04131
]
133872786
04121 Ubiquitin system [BR:
aglu04121
]
133872786
Enzymes [BR:
aglu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133872786
Membrane trafficking [BR:
aglu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
133872786
Ubiquitin system [BR:
aglu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133872786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
zf-HC5HC2H_2
Rad50_zn_hook
zf-Nse
zf-HC5HC2H
CxC4
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
133872786
NCBI-ProteinID:
XP_062166374
LinkDB
All DBs
Position
7:complement(24988900..24990962)
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AA seq
377 aa
AA seq
DB search
MASMGSSYWCYRCNRFIRVRVWEQDTVICPDCSGGFVEEIRTPTRSPLHRFPAAAAMYID
PIPPNSDQNPIPRLRRSRRNGGDRSPFNPVIVLRGPADGGGGNEPERVNFDLYYDDGAGS
GLRPLPDSMTEFLMGSGFDRLLDQLAQLEVNGVGRLEQPPASKAAIESMPIIKIVASHVS
TESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSMRNSCPVCRHELPTDVRGRNSPE
SDAGRDEETVGLTIWRLPGGGFAVGRFTGGIRAAERELPVVYTEVDGGFNNGGVPRRISW
ETSVRSSRESGGFRRVFRSFFSFLGRFRISTSSSSSASRLSSEPGLTRRRSGSSAVFSRS
WRRRRGARALDLDDNRW
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgatgggctcttcgtactggtgctatagatgcaaccgattcatccgggttcgg
gtttgggaacaagacacggtcatctgccccgactgcagcggtgggttcgtcgaggagata
cggactccaaccagatctccgctccaccggttccccgccgctgccgcaatgtacatcgat
ccaatcccgcccaattctgatcagaacccgatcccaagactccgccggagcaggaggaac
ggcggggatcgctcgcctttcaatcccgtcatcgtcctccgcgggcccgccgacggaggc
ggagggaacgaaccggaaagagtaaactttgatctctactacgatgacggagctgggtca
ggactacggcctttaccggatagcatgacggagttcttgatgggttctggtttcgaccgt
cttctggaccaattggcgcaattggaggtcaatggggtaggtcgtttagagcaaccaccg
gcttcaaaagccgctatcgagtccatgcccatcattaagatcgtggcgagccatgtctcg
acggagtcgcattgcgcggtgtgcaaggaaccgttcgagctcgactcggaggcgcgagag
atgccctgtaagcacatctaccactcggactgtatccttccgtggctgtcgatgaggaac
tcttgccccgtgtgccggcacgagctacccaccgatgtgcgtggtaggaactcgccggag
agtgatgcgggtcgagacgaagagaccgtgggactaacgatttggaggctgcccggtggt
gggttcgcggtggggaggttcactggcgggattagggccgcggagcgtgagcttcctgtg
gtttacacggaggtggatggtgggtttaacaatggtggtgttcccagaaggatttcgtgg
gagacgagcgtgagaagctcaagggagagtggtggatttcgccgggtgtttcgtagtttc
ttctcgttcttgggaaggtttagaattagtactagttcatcatcatcagcctctcgtttg
agttctgagccggggctaacgcgaagaaggagtggctctagtgctgtgtttagtcgttcg
tggagaaggcgccgaggcgcccgggctttggatttggatgataacagatggtga
DBGET
integrated database retrieval system
