Alnus glutinosa (common alder): 133872788
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Entry
133872788 CDS
T10577
Name
(RefSeq) pentatricopeptide repeat-containing protein At5g02830, chloroplastic
Organism
aglu Alnus glutinosa (common alder)
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Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR_3
PPR
PPR_1
PPR_long
RPM2
Motif
Other DBs
NCBI-GeneID:
133872788
NCBI-ProteinID:
XP_062166377
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Position
7:22978571..22984696
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AA seq
843 aa
AA seq
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MREFVILGFSSSIATPSHHRHHHQHRSTKPYRSSIPIPTKLSPSKPPFPSLLHSPSPLRS
SPDRIHLNYYAHLASKLAGDGKLEDFAMIVESVILSGANAAKFGAALSVELVAKGILTGL
REGKVRTVTEVLRKVQKLRLGPLKQADRSTMELLGVECHRIVKCGEVEEVVDLMEVLAGF
RFSIKELLKASDVIKVCVDRRNPRLAIRYACILPHAQILFCTIIHEFGKKGDLVSALTAY
EASKQNLSTPNMYVFRTIIDVCGLCGDYIKSRYIYEELLNQKITPNIYVFNSLMNVNAHD
LSYILHVYKNMQNLGVKAEMASYNILLKACCLAGRVDLAQDIYREVQHLESSGMLKLDVF
TYSTIVKVFADAKLWQMALRIKDDMLSAGVTPNTVAWSSLINACANAGLVEHSIQLFEEM
LQAGCEPNTQCCNILLHACVEACQYDRAFRLFQSWKENRVMETTDGDCSKNIYSNLTAEN
ADEECSTSMANCVSNSHHLNFTKKFPFTPTTTTYNILMKACGSDYYHARALMDEMKTVAL
SPNHISWSILIDICGGLRNVEGAIQILRNMFGAGIQPDVITYTTAIKVCVESENLKVAFS
LFEEMKKYQIRPNLVTYNTLLRARTRYGSLHEVQQCLSIYQDMRKAGYKSNDYYLEALIE
EWCEGVIQDNNQNQGECSSCNRTNLGRPESLLLEKIATHLQKSNAERLSIDLQGLTKVEA
RIVVLAVLRMIKENYHTHGYSVKDDILIVLGIGKVLDPNPGKHNLEVKNAMIKLLQDELG
LEVLSAGTRNALHEKTNMECPLESVLNLELDSSTRRPAVVQRLKVTRKSLHHWLQRRVGA
IRI
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgagagagttcgtcatccttggcttctcctcctccattgctactccttcccaccaccgc
catcaccaccaacaccgctccaccaagccctacagatcctcaattcccattcccaccaaa
ctatctccctccaaaccaccattcccaagccttcttcattctccttctcctctccgctcc
agccccgacagaatccacctcaactactatgctcacctcgcctccaagctcgccggggac
ggaaagctcgaagattttgcgatgattgtggagagtgtgattctttcgggggcaaatgcc
gccaagtttggcgctgcgttgagcgtggagcttgtggcgaaggggattttgacgggtctt
cgagaagggaaggttcgaactgtgactgaggttctgaggaaagtccagaagcttcggctt
gggccgttgaagcaggctgaccggtctaccatggagttgctgggcgtagagtgccaccgt
attgtgaaatgtggggaagtcgaggaagttgttgacttgatggaggttcttgcaggtttt
cgtttctcaatcaaagaactactgaaggcttctgacgtgattaaagtgtgcgtcgataga
cgtaacccacgattggcaataaggtatgcttgtattcttccacatgcgcagatattattc
tgtaccattatacatgaatttgggaagaagggggacctggtgtctgctttgacagcatat
gaagcatccaagcaaaatttgagtactcccaacatgtatgtcttccgcacaataatagat
gtttgtggtctctgtggtgactacatcaaatctaggtacatatatgaggagttactcaac
caaaagatcaccccgaatatttatgttttcaacagtctcatgaacgtgaacgcccatgat
ttgagctacatattgcatgtatacaagaatatgcagaatcttggtgtcaaggcggaaatg
gcatcttacaatatccttttgaaggcatgctgtcttgctggcagagttgatttggcccaa
gacatttatagggaagtacagcatttggaatcgtcgggaatgttgaaattggatgttttc
acttacagcaccattgtaaaggtctttgcggatgcaaaattgtggcaaatggcactgcgc
atcaaagacgatatgctgtcagctggtgtgactcccaacactgttgcatggtcatcattg
atcaatgcctgtgccaatgcgggtcttgtagagcattcaattcagttgtttgaagaaatg
ctgcaggctggctgtgaacccaacacacagtgttgcaacatccttttacatgcttgtgtt
gaggcttgccagtatgacagggccttccggcttttccagtcctggaaggaaaatagagtc
atggagactactgatggagattgtagtaagaatatatatagcaatttaactgcagagaat
gcggacgaagagtgcagtactagcatggcaaattgtgtatctaattcacatcacttaaac
tttactaagaagtttccctttacacccacaacaaccacatataatattctgatgaaggcg
tgtggttctgattactaccatgcaagagctttgatggatgagatgaaaacagtggctctt
tcccctaatcatataagctggtcaattttgattgatatatgtggaggcttaaggaatgta
gaaggtgccatacagattttgagaaacatgtttggtgctggaattcaaccagacgttatt
acatatacaacagccatcaaggtttgtgtggaaagtgaaaatttgaaggtagcattttca
ttatttgaggaaatgaaaaagtatcagatacgtccaaatttggtgacttataatacgctt
ctaagggcccgcaccagatacggttccttacatgaagtacaacaatgcttgtctatatat
caagatatgcgtaaagcagggtacaaatccaatgattattatctcgaggcgctcatagag
gaatggtgtgaaggagtaatacaagacaacaatcagaaccaaggagagtgcagttcctgc
aacaggaccaacttagggagacctgaaagtctacttctagaaaaaattgcgacacacttg
caaaagagtaatgctgaaagactatccattgaccttcaggggcttacaaaggttgaagct
cggattgttgttcttgcagttctgcgaatgatcaaggagaactaccatactcatggatat
tcagtaaaagacgatatcttgatcgttttaggaatcgggaaagtattagatccaaatcca
ggaaaacacaatttagaggtgaaaaatgcaatgattaagcttctgcaagatgaattgggc
cttgaggttctttcagccggaactagaaatgcacttcatgaaaagacgaatatggaatgc
cctcttgaatcggttttaaacttagagttggattcttccactagaagacctgcggttgta
cagaggttaaaggtcacaaggaaatcattgcatcattggttgcagagaagagtaggagcc
atcagaatatga
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