Alnus glutinosa (common alder): 133872949
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Entry
133872949 CDS
T10577
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aglu01009
]
133872949
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aglu03021
]
133872949
Enzymes [BR:
aglu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
133872949
Protein phosphatases and associated proteins [BR:
aglu01009
]
HAD phosphatases
Fcp/Scp phosphatases
133872949
Transcription machinery [BR:
aglu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
133872949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
TMD_POM152
Motif
Other DBs
NCBI-GeneID:
133872949
NCBI-ProteinID:
XP_062166611
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Position
7:complement(9201322..9208207)
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AA seq
659 aa
AA seq
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MARDQPISVKDAIYKLQLSLLEGIQDENQLFAAGSLMSRSDYEDVVTERSIANICGYPLC
RNSLLSDRTRKGRYHISVKEHKVYDLQETNMYCSSSCVVNSQAFAKSLQDERCLVLNSDK
LNEVLRLFGNLSLDCGDDLGKNGDLGLSGLKIQEKTETKDGEVSLEQWIGPSNAIEGYVP
QRDRSSKPSPSKNIKEGSKAKHTKSSSEKGLLINEIDFIITKDEYSVSKVPPGSTKTTSY
TKSKEPKGKVSYEDSEDQVTIFEKPSVPTKNDSERKSRGSRGEKNKIVSKDNHSILEVPS
ASNPCAIGPNVSTAEAEEEAHVEKLAKSNGTILKSCLKPSGRMKRSCSVTWADEKVNGTG
SGNLCDIRDVENKIAPKKLGGTDLGDDEMLWFVSAEACAKALSQAAEAVASEESDATDAV
YEAGIIILPHQSDADEEELEEDVDMLEPESAPLKWPGKPGIPHPDLFDPEDSWYDAPPEG
FSLALSPFATMWMALFEWTTSSSLAYIYGRDESFHEDYLSVNGKVYPCKIVLADGRSSEI
KQTLAGCLARALPGLVADLRLPTPISILEQGMGRLLDTMTFTDALPAFRFKQWQVIVLLF
IEALSVCRIPALTPHMTNRRMLLLKVLDGAQISVEEYEIMKDLMIPLGRAPHFSSQSGA
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcaagggatcaaccaatctctgtgaaagatgctatttacaaactgcagctttccctc
cttgaaggcatccaagacgaaaaccagctttttgctgctggatctctgatgtcgcgcagc
gactatgaagatgttgtgaccgagcgttcgattgcaaacatctgtggttaccctctttgc
cgcaattctctgctgtccgatcgcactcggaagggccgctatcacatttctgtgaaggaa
cacaaggtttatgatctacaggagacgaacatgtattgctcttccagttgtgttgtaaac
agccaagcgtttgctaagagcttgcaagatgagagatgcttagttttgaattcagataaa
cttaatgaggttttgaggttgtttggaaacttgagtttggattgtggggatgatttgggg
aagaatggggatttaggattgtccggcttgaagattcaggagaaaacagaaaccaaggat
ggggaagtttctttggagcagtggattggtccatcaaatgcaattgaaggttatgttcct
cagagagatcgcagttccaagccttcaccttcgaaaaatatcaaagaagggtccaaagct
aaacataccaagtcgagtagtgaaaaaggcttgcttattaatgagatagacttcataatc
actaaagatgaatatagtgtctcaaaagtgccaccaggttcaacaaagactacctcctat
actaaatcaaaggaaccaaagggaaaagtgagttatgaggactctgaggatcaagtcacc
atatttgaaaaaccatctgttcccacaaagaatgattctgaaaggaaatcaagaggatca
agaggggaaaagaataaaatagtcagcaaagataatcatagcatcctggaggtgccttca
gcttcaaatccctgcgcaattggtcccaatgtaagtactgcagaagcagaagaggaagcc
catgttgaaaaattagctaaatcgaatggaaccatactcaaatcctgtcttaaaccttca
gggagaatgaaacgtagttgctctgttacctgggctgatgagaaagttaatggcactggg
agtggaaatctttgtgacattagagacgtggaaaacaaaatagctcctaaaaaattaggt
ggtacagatttgggagatgatgaaatgttatggtttgtatctgcggaagcttgtgcaaaa
gcattgagccaggcagcagaagctgttgcttccgaagaatctgatgccactgatgccgtg
tacgaagctggaattattatattgccacatcaaagtgatgcagatgaagaggaattggag
gaggatgttgatatgctggaaccagaatcagctcctttaaagtggccaggaaagcctggg
attccacatcctgatttatttgaccctgaagattcatggtatgatgctccaccagaaggt
ttcagtttggctttatcaccttttgctacaatgtggatggctctctttgaatggacaacg
tcatcttctttggcttatatatatgggagagatgaaagttttcatgaagattatctatca
gtaaatgggaaggtgtacccctgtaagattgtcttggcagatggtcgttcttctgaaatc
aagcaaactcttgctggttgtcttgctcgggctttgcctggactagttgctgatctaaga
ctgccaacaccaatatctattttggagcaaggaatggggcgcttgttggatacaatgact
tttaccgatgcacttccagctttcagatttaaacagtggcaagtgattgttcttctgttc
attgaagctctctctgtttgtaggatccctgcacttactccacacatgactaataggagg
atgttgttgctgaaggtgttggatggtgcccaaataagtgttgaagaatatgagattatg
aaggatctgatgattccacttggcagagctcctcatttctcatctcagagtggagcttga
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