Alnus glutinosa (common alder): 133873037
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Entry
133873037 CDS
T10577
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133873037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133873037
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133873037
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_2
TPR_12
Motif
Other DBs
NCBI-GeneID:
133873037
NCBI-ProteinID:
XP_062166733
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Position
7:5308475..5320338
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AA seq
863 aa
AA seq
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MASEQGFSGWTDLLHSSTKLLEQSGPSAQFPPLQRNLDQLEALSKKLKAKTVRAEAPSQS
IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEA
QKDNLGSFNDYMMKVLQEDWQKGKRDFLQSLSRISTLPRTNMIETRSGGSHPGQPVSIAS
SSQVSPGPSSMDLIPLANKPILDKKAIVYAEVVKNLNNARERGLPFKSATAFKGAYESLG
VEGSSGKSVNMQKIWHLIQMLMGEDSTMQHNVSKKMSLIIGARRHLEWGHEKYIMDTIQS
HPAQAALGGAVGNLQRVRAFLRIRLRDYGVLDFDAGDARRQPPVDTTWQQIYFCLRTGYY
DEARNVALSSRASHQFAPLLAEWINTGGMVPVETAVAASDECEKMLRMGDRVGRAAYDKK
KLLLYAIISGSRRQIDRLLRDLPNLFNTIEDFLWFKLSAVRDYSSGVSSVIQNEGLVPYS
LDDLQVYLNKFDPSYYTKNGKDPLVYPYVLLLSIQLLPAVLYWSKETGDEGYNIDAAHMS
IVLADHAVLSEGAGAGQKLGVMDAYAEASSIIRQYGSVYLRHGDLSMALEYYAQAASAVG
GGQLSWTGRGNVDQQRQRSLMLKQLLTELLLRDGGVYLLLGSRGTGEEGQLGRFLIDAKA
RHQFLLEAARQCQEAGLYDKSIEIQKRVGAFSMALDTINKCLSEAICALSHGRLDGESRT
AGLIHSGNEILETYRYYPEVSPQEREHVLEQQTMLRQLEAILSIHKLAIMGHHLDALREV
AKLPFLPLDPRAPDITVDVFQNLSLHVQACVPDLLKVALTCLDNVTDSDGSLRALRAKIA
SFLANNLNRNWPRDLYEKVARSL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgagcaaggcttcagtggctggaccgacctgctccactcctccacgaagctt
ctcgaacaatccggtccttccgctcagttcccgcctcttcagagaaacttagatcagtta
gaagcattatctaagaagctcaaagcaaaaaccgtgcgagctgaggctccttctcaatct
attgctgccacaaggcttcttgcacgtgagggaataaatgcagagcaacttgcacgggat
ctgaagtcttttgaattgaagacaacatttgaggatgttttccctgctgaagcaacaagt
gtcgaagagtatttgcagcaggttcatgagatggcaatggtctcagccattcaggaagct
cagaaggataatctcggaagctttaatgattacatgatgaaagttttacaggaagattgg
caaaagggaaaacgcgattttcttcagagtttaagcagaatttcaacattacccaggact
aatatgattgaaacccgctctgggggttctcatcctggtcaaccagtgtccattgcatct
agctctcaagtttcacctggtccatctagcatggatctcatacctctagcaaacaagcct
atcctcgataaaaaggcaattgtctatgctgaagttgtgaagaatctgaacaatgcaagg
gagcgtggcttaccatttaagtctgctacagctttcaagggtgcttatgaaagtttgggt
gttgagggatctagcggaaaatctgttaacatgcagaagatatggcacctcattcagatg
ctgatgggtgaggattcaactatgcaacataatgtttcaaagaagatgtcactaatcatt
ggtgcaaggcgccatctggaatgggggcatgagaaatatatcatggatacaatacaaagt
catcctgcacaggctgctcttggtggggctgttggaaatttgcaaagagtccgcgccttt
cttcggattcgtttgagggattatggagttctggattttgatgcaggtgatgctcgtaga
caacctcctgttgataccacctggcagcagatatatttttgcttgaggactggatattat
gatgaagcaagaaatgtggctctgtcatcccgtgcttcacaccaatttgctcccctgctt
gcagagtggatcaatactggagggatggtgccagttgagactgcagtcgctgcatcagac
gagtgtgagaaaatgttacgaatgggtgatcgggttggacgagctgcgtatgacaagaaa
aagttgttgttgtatgctatcatatccggttctcgcaggcaaattgaccgcctgcttaga
gatctaccaaatctgttcaatactatagaggatttcttatggttcaaactgtctgcagta
cgagactactcaagtggagtctcatctgttattcagaatgagggattggtaccatacagt
ttggatgatttgcaggtctacctgaacaaatttgatccatcatattataccaaaaatgga
aaggaccctctggtatacccttatgttttgcttttaagcatccagttgctaccagctgtc
ttatattggtcaaaggaaacaggagatgaaggatataacattgatgctgcccacatgtcg
attgtgttagcagaccatgctgtcctttctgaaggtgctggtgctggacaaaaactggga
gtgatggatgcttatgctgaggcatccagcataattaggcagtatggatctgtgtattta
cgccacggtgatctatcaatggcattagaatattatgcccaagctgcttctgcagtaggt
ggtggacagttgtcatggacaggaagaggtaatgtggatcagcaaaggcagagaagcttg
atgttgaagcaactccttactgagctgttgttacgggacggtggggtctatcttttattg
ggttcaaggggtactggagaagaaggtcaactaggaaggtttttgattgatgcgaaagca
agacatcaatttctgcttgaagctgctcgccagtgtcaggaagctgggctttatgacaaa
tctatagaaattcagaagagagttggggcattttcaatggcactggataccatcaataag
tgcctctctgaagcaatatgtgccctctcacatggtagattagatggcgagagccggact
gctggcctcattcactctggcaatgagatactggagacatacagatattatcctgaagtc
agtcctcaagagagagagcatgttttggagcagcaaactatgttacgacaacttgaggca
atattgtcaatccacaagttagcaataatgggccatcatctagatgctttaagggaagtt
gccaaacttccatttctcccattagatccacgagcgccagatattactgttgatgtgttc
cagaatttatctcttcatgtacaagcttgtgtaccagaccttctgaaggttgctctcact
tgcttggacaatgtgacagattctgatggatcacttcgtgctttgagggctaagattgca
agctttcttgctaataatttgaataggaattggccccgtgatttgtatgaaaaggttgct
cggagcttgtga
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