Alnus glutinosa (common alder): 133873099
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Entry
133873099 CDS
T10577
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic isoform X1
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133873099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aglu03400
]
133873099
Enzymes [BR:
aglu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
133873099
DNA repair and recombination proteins [BR:
aglu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
133873099
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
DivIC
Motif
Other DBs
NCBI-GeneID:
133873099
NCBI-ProteinID:
XP_062166804
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Position
7:4776268..4785472
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AA seq
526 aa
AA seq
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MSQALQLGLRSFVNLPSSAVGLRRNLKRTGTLVCFRVRAMGSKRQLSKSLVPVLSEDKND
KKLKGLMGTNPSSEKGVVKEYGVRSSSVEIERFKDDPGRIEAMTVQELRTALRSVGVPAK
GCKRDLVYALKCFVDKNMDGKNSLAVEEQVSSMSAENISLKTKVTNLSNEDSVEDVNTDL
EVPGFPQHKGRVKKSAAESGKVSRAKRKVSSNIVTEVVTTDEGVNTPIIQTEPWTVLAHK
KPHKGWIPYNPRTMRPPPITRDTNSVKLISWNVNGLRALLKLEGSSAFQLSQREDFDVLC
LQETKLQEKDVENIKQCLIDGYENSFWTCSVSKLGYSGTAIISRIKPLSVRYGLGVSDHD
SEGRLVTAEFDSFYLLNGYVPNSGDGLKRLSYRVTQWDPALSNYMKELEKSKPVILTGDL
NCAHEEIDIYNPAGNKRSAGFTDEERQSFGTNFLSRGFVDTFRRQHPGVVGYTYWGYRHG
ARKTNKGWRLDYFLVSESIADKVYDSYILADVGGSDHCPIGLVLEL
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcattgcaattggggcttaggagtttcgtgaaccttccaagctctgcagta
ggtctgaggaggaatttaaagagaactggaacattggtttgttttagagtaagagcaatg
gggtctaaacggcagctctcgaagtcgctggtacccgttttatctgaggacaagaatgat
aagaaactgaagggattaatgggtacaaatcccagttctgagaagggtgtggtcaaggaa
tatggtgtgagaagctcttcagttgagattgagagatttaaggatgacccaggaagaatc
gaggcaatgacggttcaagagctcagaactgcattgaggagcgtgggggtccctgctaaa
ggctgtaaacgcgatcttgtgtatgctttgaagtgttttgttgacaagaatatggatggt
aaaaattctctggcagtagaagaacaagtatcctccatgtctgctgaaaatatatcacta
aagactaaggttacgaatttatctaatgaagacagtgttgaagatgtgaacactgatttg
gaggttcctggatttccacagcataagggaagagtaaagaaatctgcagctgaaagtggg
aaggtctcccgggcaaagagaaaagtttcttcaaacattgttactgaagttgtcaccact
gatgaaggagttaatacccccatcatacaaactgaaccatggacggttcttgcccacaag
aagcctcataaaggttggattccatataatcctagaaccatgaggcctccacctattacc
agggataccaattctgtaaagcttatctcttggaatgtcaatgggttgagagctttattg
aagttagagggatcttctgcatttcaactttcacaaagggaagattttgatgtgttgtgc
ttgcaagagaccaaactacaggagaaggatgttgaaaatatcaaacagtgtcttatagat
ggctatgagaatagcttctggacttgtagtgtttccaaacttggttattctggaacagca
attatctcaaggataaagccactttcagtcagatatggcctaggcgtatcagatcatgat
agtgaaggtcggcttgtgacagcagagtttgattcattttatctattgaatggatatgtc
cctaattctggagatggcttgaaaagactgtcatacagggttacacaatgggatccggct
ctcagcaattacatgaaagagctggagaagtcaaagcccgtaattttgactggtgatctg
aattgtgctcatgaagagatagacatatataaccctgctggaaataaaagaagtgctggg
tttaccgatgaagaaaggcaatcgtttggaacaaacttcctgtctaggggatttgtggat
acctttagacggcaacacccaggagttgttggctatacttactggggttatcggcacggt
gctcgcaaaactaacaaaggatggcggctcgactacttccttgtatcggaatccattgcc
gacaaagtttacgactcgtatattctagctgatgttggcggtagtgatcattgtcccatt
ggccttgtacttgagctttag
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