Alnus glutinosa (common alder): 133873319 Help Entry 133873319         CDS       T10577                                  Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism aglu  Alnus glutinosa (common alder) Pathway aglu03040   Spliceosome aglu04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:aglu00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     133873319   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     133873319  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:aglu03041]     133873319    04121 Ubiquitin system [BR:aglu04121]     133873319    03400 DNA repair and recombination proteins [BR:aglu03400]     133873319 Enzymes [BR:aglu01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      133873319 Spliceosome [BR:aglu03041]  Complex B   Other components    Prp19 complex     133873319  Complex C    Prp19-CDC5 complex     133873319 Ubiquitin system [BR:aglu04121]  Ubiquitin ligases (E3)   U-box type E3    133873319 DNA repair and recombination proteins [BR:aglu03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     133873319 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_WDR75_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_Aladin Beta-prop_DCAF4 zf-Nse Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_DCAF12 U-box PAS_11 Tricorn_2nd WD40_like PUMA_CC V_ATPase_I_N Motif Other DBs NCBI-GeneID:  133873319 NCBI-ProteinID:  XP_062167025 LinkDB All DBs Position 1:complement(12939400..12953560) Genome browser AA seq 524 aa AA seqDB search MNCSISGEVPEEPVVSKKSGLLYEKRLIERHISDFGKCPITGELLTLDDIVPIKTGKIVK PRPLQAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK ERDEARSLLAQAERQIPMPGSAAVTANAPALSNGKRAAEDEELGPGGKRIRPGISAGIIA ELTDCNASLSQQRKKRQIPPTVATLDDLERYTQISSHPLHKTSKPGIVSLDIHYDKDIIA TGGLDTNAVLFDRPSGQILSTLSGHSKKVTSLKFVARGDLFLTGSADKTVRLWQESDDGN YNCRHILKDHTAEVQAITVHATNNYFVTASLDSTWCFYELSSGLCLTQVVDAADSNGYTS AAFHPDGLILGTGTSEAVVKIWDVKSQANVARFDGHVGAVTSISFSENGYFLATAAHDGV KLWDLRKLRNFRTFSPYDSDTPTNSVEFDNSGCYLAIAGSDTRVYQVANVKSEWSCIKTF PDLSGTGKATCAKFGTDAKYVAVGSMDRNLRIFGLPGEDGPLES NT seq 1575 nt NT seq  +upstreamnt  +downstreamnt atgaactgctcaatctccggcgaggtgccggaagagccggtggtctccaagaaatctggg ctgctctacgagaagcgcttaattgagaggcacatctcggattttggaaaatgccccatt acgggggaactgctgacactggatgatattgttcctatcaagacaggcaagatagtgaag cccagacctctacaggctgcgagcatccctggcatgcttggaatgtttcagaatgaatgg gatggtttgatgctatccaattttgcattggaacaacaactacatacagcaaggcaagag ctaagtcatgctctgtaccagcatgatgctgcttgccgtgtgattgcaagacttaaaaaa gaaagggatgaagcaagatcattacttgctcaggccgaaaggcagatacccatgcctgga tcagcagcagttacagcaaatgctcctgcacttagcaatgggaaaagagctgctgaggat gaggagttgggccccggtggaaagagaatacgtcctggaatatctgctggcattattgct gagctaactgattgtaatgcatctctctcacagcagcggaaaaagcggcagatacctcca acagtggctactcttgatgatcttgagagatatactcagatttctagtcacccccttcac aaaacaagcaaacctggcattgtatctcttgatatccattatgacaaggacataattgca acgggagggcttgacacaaacgctgtactttttgatcgaccatcaggacagatcttatct acgctcagtggtcattccaaaaaggtcacaagtctaaaatttgttgctcggggcgattta ttcttaactggctcagcagataagactgttcgcttgtggcaagagtctgatgatgggaac tataactgtagacacattttgaaggatcatactgctgaggtgcaagcaattactgtccat gctacgaataactactttgtgactgcttctcttgatagcacatggtgcttttacgaactt tcctctggattatgtctaacacaggttgtggatgctgcagattctaatggctatacttct gcggcatttcatcctgatggtctaatccttggaacaggcacttcagaggctgtggttaaa atttgggatgtgaaaagtcaggcaaatgttgcaagatttgatggacatgttggggctgta acttccatatctttctctgaaaatggctatttccttgcaactgctgctcatgatggtgtt aagctttgggatttacgcaaattgaggaacttccggacattttccccgtatgattcagat accccgacaaactctgtggagtttgataatagtggatgttaccttgcaattgctgggtcg gatacaagagtttaccaagttgcaaatgttaaatcagaatggagttgtatcaaaactttt cctgatttgtctggcacaggtaaagcaacttgtgcaaaatttggtacggatgcaaaatat gtggcagtaggatcaatggacagaaaccttcgtattttcggtttgcccggtgaggatggt ccattagaatcatag

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