Alnus glutinosa (common alder): 133873747
Help
Entry
133873747 CDS
T10577
Name
(RefSeq) uncharacterized protein LOC133873747
KO
K14794
ribosomal RNA-processing protein 12
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aglu03009
]
133873747
Ribosome biogenesis [BR:
aglu03009
]
Eukaryotic type
90S particles
Other 90S particles
133873747
Pre-60S particles
Other pre-60S particles
133873747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
MMS19_N
ARM_TBCD
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
133873747
NCBI-ProteinID:
XP_062167481
LinkDB
All DBs
Position
7:21226423..21237776
Genome browser
AA seq
1271 aa
AA seq
DB search
MEDMDGTSDELCNSILSRFGNSTNEDHHHLCTVIGTMSQELKDQNLPSTPVAYFGATCSS
LDRLASEPQQHVHVVQSLLSILHIVLPRIPLSILHKKAEFLSNLLLRVLRSPSLSVGAAT
FGLKCVSHLLSIRDAPNWSEVSHLYGVLLRFLTDSRPKVRRQSHLCLRDSLSRFQEESVR
ASASEEITKIFERSPLLAGGSKMSATEGSKGAQEVLYVLDALKECLPFMSMKYKTSVLKH
FKTLMELHQPLVTRRITDSLYFLLLVPDLAVSPEALRDLISSIALFVSTNETSADAMTFA
ARLLDVGMSKMYSLNRELCVTKLPVVFNALKDILASEHEEAIYAAMNALKSMIDACIDEK
LIKEGVDQIIMMNPHNDARRIGPTIIEKICVTIESLLDYHYAAVWDMAFRVVSTIFDKLG
HSSSYLLRGILSSLADMQKLPDEDFPFRKQLHECLGSALGALGPETFLGLLPLNLEAEDL
SEANVWLFPILKQYTIGAHLSFFTDSVLGMIGLMKQKSRKLELQGRVISSRTADAFVYSL
WSLLPSFCNYPCDMAESFKDLEKALCSALHEEPDTRGVICSSLQILIQQNKKILEEKGEM
PDTEEGIARQRAVARYTPQVAAVNMSVLKSSARVLLNVLLGVLVQSKADDGGSLQSTICE
LASISEEEVVPKFFKIRIEKPLKVIQEARKLEDSRNSNSRQIDHASNESSPSLLRAWILD
LAVSLLPCLNTKKNEEIDALFVTIKPALQDVEGLIQKKAYKVLSAILKNCDGFLSAKLEE
LLGLMIEVLPSCHFSAKRHRLDCLYFLIVHVAKDNSEQRRRDIISSFLTEIMLALKEANK
KTRNRAYDILVQIGHACGDEEKGGNRENLFQFFNMVAGGLAGETPHMVSAAVKGLARLAY
EFSDLVSTACNLLPSTFLLLQRKNKEIIKANLGFLKVLVAKSQPEGLQMHLMSMVEGLLK
WQDNTKNHFKAKVKHLLEILVKKCGLEAVKAVMPEEHVKLLTNIRKLKERKEKKLRAKSE
ARSQLSKATTSRLSKWNDTKLFSDFGDDESKGSDAEYMDARTMSGRRSKGSSQLKSKASL
LRSKSRAAKNLPEHLFDQLEDEPLDLLDRQKTMLSLRSKHRKRKLDLDEPELDSEGRLII
RDGEETKSETPFDLDLDAKSEAGSHLSVNARRNQKRRKLADSDGWAYTSSEYSSKKAGGD
VKRKDKLEPYAYWPLDRKMMSRRPEHRAAARKGMAGVVKMTKKLEGKSASIALSSKGLKF
KRSQKKRGSRK
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatggacggaacctccgacgagctctgcaattcgatcctctctcgttttgga
aactccacgaatgaggaccaccatcacctctgcacggtcataggcaccatgtcccaagag
ctcaaggaccagaacctcccttccacaccggttgcctacttcggcgccacttgctcttcc
ctcgaccgccttgcctcagaaccccagcagcatgtccacgtcgtccaatccctcctcagc
attctacatatcgtccttcccagaatacccctatcaattctccacaagaaggcagagttc
ttgtccaacctattgcttcgggttctgcggtctccgtcgctgtcggtcggcgctgcaaca
tttggattgaaatgcgtttcccatttgttgagcattcgagacgctcccaactggtctgag
gtgtcccacttgtatggtgttctgttgcggttcctcacggactcgcgtcctaaggtaaga
aggcaatcacatctgtgtcttcgagattccttatcaagatttcaagaagaatcagtgcgg
gcatctgcaagtgaagagattacaaagatatttgaaaggtctcctctgcttgcaggtgga
tcaaaaatgagtgccactgaaggatccaaaggagctcaggaggtcctttatgttttggat
gctttgaaagagtgtcttccctttatgtcaatgaagtataaaacgagcgtcctcaagcac
ttcaaaactctaatggaactgcaccaacccctagtcacaagacgcataacagatagtttg
tattttcttcttcttgtcccagatctagctgtttctcctgaggcattgcgtgatttgata
agctcaatagctttgtttgtctccacgaatgagacatctgcggatgccatgacattcgct
gctcgcttgcttgatgttggaatgagtaaaatgtattcacttaatagggaattatgcgta
acaaagctccctgttgtattcaatgcactcaaagatattttggcatctgaacatgaggag
gccatatatgcagccatgaatgcattgaagagtatgatagatgcttgcattgatgaaaaa
ttgatcaaagagggtgttgatcagattattatgatgaatccacacaatgatgcaaggagg
attgggcctactatcattgaaaaaatatgtgtaactatcgaaagcttacttgattatcac
tatgctgctgtctgggacatggcatttcgagttgtttcaacaatttttgataaattaggg
cattcttcttcttatcttttgagggggatccttagcagtttggctgacatgcagaagttg
cctgatgaagattttcctttcaggaaacagctgcatgaatgccttggatcagctcttggt
gcattgggacctgaaacttttttgggcctgttacctcttaatttagaggctgaagaccta
tctgaggcaaatgtttggctctttccaattctgaagcagtatacgataggtgcccattta
agcttcttcacagattcagttttgggtatgattggattgatgaagcagaaatctcgtaag
cttgagttacaaggacgggtcatttcatcaagaactgcagatgcgtttgtgtactctttg
tggtctttattgccttcattttgcaactatccttgcgatatggctgaaagtttcaaggat
ctagaaaaagctttatgtagtgcccttcatgaagaacctgatactcgtggagtaatatgc
tccagtttgcagattcttattcaacagaataagaaaattttggaagagaaaggtgagatg
cctgatactgaagaaggaattgccagacagcgagcagtggcccgttacaccccacaggtt
gcagcagttaatatgagtgtgcttaagtcatctgcccgtgtgttattaaacgttttgtta
ggtgtccttgtgcaatctaaagcagatgatggtggttctttacagtccacaatctgtgaa
cttgcttcaatatcagaggaagaagtagtaccaaagttcttcaaaattagaattgagaag
cctttgaaggttattcaagaggccagaaaactagaagattcaagaaattctaattctagg
cagattgaccatgcctcaaatgaaagttcaccatcacttttgagggcatggatattggat
ttggcagtttcacttttaccttgtttgaacactaaaaagaatgaagagattgatgcttta
tttgtcacaataaagcctgcattacaggatgttgaaggtctgatacaaaagaaggcatac
aaagttctttcagctattctcaagaactgtgatggctttctttcagcaaagctcgaggaa
ttgcttgggcttatgattgaagtgctaccttcatgccatttttccgccaaacgtcacaga
cttgattgcctgtactttctaatagtacacgttgccaaggataattcagagcagaggcga
cgtgacatcattagttctttcctaacagaaataatgcttgcacttaaagaggcaaataaa
aaaacaagaaacagagcatatgatattcttgtccaaattggccatgcatgtggggatgaa
gagaaaggcggaaatagagaaaacttgtttcaattttttaacatggtagccggaggacta
gctggtgagacacctcacatggtcagtgctgcagtcaaaggcttagctcgcttggcctac
gagttttcagatcttgtttcaactgcatgcaatttacttccatccacatttctcctcctc
cagagaaagaataaagaaattatcaaggctaatttaggttttttaaaggtgttggtggca
aaatcgcagcctgaagggttgcaaatgcatttgatgagcatggtggaaggcttgctgaag
tggcaagataacaccaaaaaccactttaaagccaaggttaagcatctcctggaaattctt
gtcaagaagtgcggtctggaggcagttaaggctgtgatgcccgaggaacacgtgaaactc
cttactaatatacgaaagctcaaggaacggaaagagaagaagctaagagctaaatcagaa
gcaagatctcaactgtcaaaagcaactacatccaggctaagcaaatggaatgatacaaaa
ttattttctgattttggtgatgatgaaagcaagggaagtgatgccgagtacatggatgcc
aggacaatgtctggtcgacggagcaagggttcctcacagctaaagtccaaagcatcctta
ttgcgctccaagagtagagcagctaagaacttgcccgagcacttgttcgaccaattagaa
gatgagccacttgacttgcttgataggcaaaaaacaatgttatctcttcgatctaaacat
cgaaagcggaaattagatttggatgagccagaactggactctgaagggcgcttgattatt
cgtgatggagaagaaacaaagagtgaaacaccctttgaccttgatttggatgcaaagagt
gaagcaggtagtcacttgtcagtgaacgcaaggagaaaccagaagcgcaggaaattagca
gactctgacggttgggcttacacaagtagcgagtactctagcaagaaggcaggtggggat
gtgaaaaggaaggataagcttgaaccatatgcatattggccacttgatcgcaaaatgatg
agccgtagacctgagcatcgggctgctgcaagaaaagggatggcaggtgtggtaaagatg
acaaaaaagcttgaagggaagagtgcctcaattgcactctccagtaagggcttgaagttt
aaaaggagtcaaaagaagaggggcagcagaaaatga
DBGET
integrated database retrieval system
