Alnus glutinosa (common alder): 133874028
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Entry
133874028 CDS
T10577
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133874028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133874028
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133874028
mRNA degradation factors
5'-3' decay
Decapping complex
133874028
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
133874028
NCBI-ProteinID:
XP_062167840
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All DBs
Position
7:3448557..3453661
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AA seq
370 aa
AA seq
DB search
MSQTGKLMPNLDQQSTKMLNLTVLQRMDPFIEEILITAAHVTFYAFNIESSQWSRKDVEG
SLFVVKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYELQVPYLLYRNASQEVNGIWFYNP
QECKDVGNLFTRILNAYSKVPSKLKVSSSKSEFEELEAVSTMSVMEGPLEPSSSATDAPE
DSSFRNFFGAATSIGNSGSNLANSRQSAQPAHPSSAAIPLSSHSPSVVSSPAPTPQIPSL
SLLASSNPNPLQDTLDPISSSNRGSNLLKPSSFFAPPSSSALIMPPISSSVSSTPALHPP
LNLQRPYGTPMLQPFPPPTPPPSLTPSSAPPFDGLLISRDRVRDALLVLVQDDQFIDMFY
KALVKVHHHP
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaccggaaaattgatgcccaatctcgaccagcagagcaccaaaatgctcaat
ctcaccgtgctccagagaatggaccccttcatcgaagagattctcatcaccgcggcgcac
gttacgttctatgcgttcaacatcgagagcagccaatggagtcgcaaagacgtagaagga
tctctttttgtcgttaaaaggaatactcaacctcggttccaattcattgtaatgaatcgg
cgtaacacagataacctagtggagaatcttttgggagattttgagtatgaacttcaagtt
ccatatctgttgtaccggaatgcttcccaagaggttaatggtatttggttttacaatcca
caggagtgtaaggatgttggaaacctatttactaggattcttaatgcgtattcaaaagtt
ccttcaaagttgaaagtatcttcaagcaaaagtgagtttgaggaacttgaagcagtctca
accatgtcagtgatggaaggccctctggagccatcatcatctgccactgatgctcctgaa
gattcttcctttcgaaatttttttggagcagctactagtattggaaacagtggttcaaat
ctagcgaactcaagacagtcagcacagcccgcccatccttcttctgcagctatcccttta
tcttctcattcacccagtgttgtttcctctcctgcaccaactccacaaataccatcactc
tctcttttggcttcatctaatccaaaccccctccaagacactcttgatccaatcagcagc
agcaaccggggctctaatcttctgaagccctcttcattctttgcacccccttcctcgtct
gcactgataatgccacctatttcttcatctgtatcaagtactcctgctcttcatcctccc
ctgaatttgcaacgcccatatggcactccaatgcttcaaccctttccaccacctactcca
ccaccgtctcttactcctagttctgctcctccgtttgatggactgcttattagcagagac
agagtacgtgatgcacttctggtgcttgttcaggatgatcaatttattgacatgttttac
aaagctttggtgaaggtgcaccaccatccatga
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