Alnus glutinosa (common alder): 133874091
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Entry
133874091 CDS
T10577
Name
(RefSeq) ABC transporter A family member 1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133874091
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aglu02000
]
133874091
Transporters [BR:
aglu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
133874091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
SMC_N
RsgA_GTPase
AAA_22
AAA_29
nSTAND3
Motif
Other DBs
NCBI-GeneID:
133874091
NCBI-ProteinID:
XP_062167906
LinkDB
All DBs
Position
7:complement(5569992..5616374)
Genome browser
AA seq
1892 aa
AA seq
DB search
MGTGRRQLKAMLRKNWLLKIRHPFVTSAEILLPTVVMLLLIAVRTQVDTQIHPAQPYIRK
DMFVEVGKGVSPSFQQILELLLAKEEYLAFAPDTEETRTMINLISMKFPLLKLVTRVYKD
ELDLETYIRSDIYGTCNQVKNCSNPKIKGAVVFHDQGPQLFDYSIRLNHTWAFSGFPDVK
SIMDVNGPYFNDLELGVSTVPTMQYSFSGFLTLQQVMDAFIIFASQQAETNSTSQIIELT
SAQSFGTASSLKLPLMQFSPSSIRMAPFPTREYTDDEFQSIIKNVMGVLYLLGFLYPISR
LISYSVIEKEQKIKEGLYMMGLKEGIFHLSWLIAYALQFAISSGIITACTMTSLFKYSDK
SVVFMYFFSFGLSAIMLSFLISTFFTRAKTAVAVGTLSFLGAYFPYYTVNDQAVPMILKV
LASLLSPTAFALGSINFADYERAQVGLRWSNIWRASSGVNFVVCLLMMLLDALLYCVIGL
YLDKVLPRENGIRYPWNFIFHRCFWKKKSIVEHHASSLKVTVNDKISKKKASFSGKDTFE
PAVEAISLDMKQQELDGRCIQIRNLHKVYATKKGKCCAVNKLKLTLYENQILALLGHNGA
GKSTTISMLVGLLPPTSGDATVFGKNIITDMDEIRKGLGVCPQNDILFPELTVREHLEIF
AALKGVKEEILERVVTDMIDEVGLADKTNTTVEALSGGMKRKLSLGIALIGDSKVIILDE
PTSGMDPYSMRLTWQLIKKKKKGRIILLTTHSMDEADELGDRIAIMANGSLRCCGSSLFL
KHQYGVGYTLTLVKSAPTASVASDIVYRHIPSATCVSEVGTEISFKLPLASSSSFESMFR
EIESCMGRSVGNSETSGCEDKDYLGIESYGISVTTLEEVFLRVAGCDYDEVECIERNEGF
LLPDAVISLASHDHAPKKILYSKVLGNYKCILGVISTKVGRACGLIFATVLSFINFLSMQ
CCCCCFISRSTFWQHSRALFIKRMTSARRDRKTIVFQLLIPAVFLLFGLLFLKLKPHPDQ
RSLTFTTSKFNPLLSGGGGGGPIPFDKSWPIAKEIAQYVEGGLIQSFKPSSYKFPDSKKA
LADAIEVAGPTLGPVLLSMSEFLMSSFNESYQSRYGAIVMDDQNEDGSLGYTVLHNSSCQ
HAAPTFINLMNAAILRLATHNKNMTIQTRNHPLPMTESQRLQRHDLDAFSAAVIVSIAFS
FIPASFAVPIVKEREVKAKHQQLISGVSVLSYWSSTYIWDFVSFLFPSSFAIILFYIFGL
DQFIGRGCVLPTVLMLLGYGLSTASLTYCLTFFFSDHTMAQNVVLLVHFFTGLILMVISF
IMGLIQTTASANTFLKNFFRLSPGFCFADGLASLALLRQGMKDKSSDGVFDWNVTGASIC
YLGLESIIYFLLTLGLELWPSHKLNPVRIKQWWSMKGLQPGPSSYLEPLLKPSSKTVALD
LDEDIDVKIERHRVLSGSIHNAIIYLRNLQKVYPGGMHHGSKVAVQSLTFSVQAGECFGF
LGTNGAGKTTTLSMLSGEESPTGGTAYIFGKDICSNPKAARQHIGYCPQFDALLEFLTVR
EHLELYARIKGVPEYRIDDVVMEKLEEFDLLKHADKPSFSLSGGNKRKLSVAIAMVGDPP
IVILDEPSTGMDPLAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGRL
RCIGSPQHLKTRFGNHLELEVKPTEVSTLDLANLCQIIQERLFDIPSHPRSLLDDLEVCI
GGIDSVASENASAAEISLSKEMIIAIGHYLGNEERTKALVLSTPVSDGIFGEQLSEQLVR
HGGIPLPIFSEWWLAKEKFSVIDSFILSSFPGVTFQGCNGLSAKYQLPYREGLSLADVFG
HLERNRIQLGISEYSISQSTLETIFNHFAANS
NT seq
5679 nt
NT seq
+upstream
nt +downstream
nt
atgggaactgggcggagacagttgaaggccatgctccgcaagaactggctcctcaaaatc
cgtcatcctttcgttacctctgctgagatattgctccctacggttgtaatgttgttgtta
atagcagtaaggacgcaagtcgatacgcaaattcatccagcacagccgtatatccggaaa
gatatgtttgtggaagtgggcaaaggagtatctcctagtttccaacaaattttagaattg
ttgttggcaaaggaagagtatttggcttttgcaccagatacagaagagacgaggacaatg
attaacttaatctcaatgaaatttcccttgttgaagctagttactagagtttacaaagat
gaattagatctggaaacctacatacgctcggatatctacggaacttgtaatcaagtcaag
aattgttcaaatccaaagatcaaaggtgcagtagtgtttcatgatcaaggtcctcagtta
tttgattatagtatacgcctcaaccacacttgggctttctcgggatttcctgatgttaaa
tccatcatggacgtaaatggtccttatttcaatgacttggaactgggtgtcagtactgta
ccaacaatgcagtatagcttcagtggatttttgactctccagcaagtaatggatgcattc
attatatttgcttcccagcaagctgaaactaactctacctctcaaattatagaacttact
tcagcacaatccttcggcacagcctcctcgcttaagttgccattgatgcaatttagccct
tcaagcatacgaatggctccctttccaactcgtgaatacactgatgatgagttccagtcc
atcattaagaatgttatgggtgtattatatcttttgggatttctctatccaatttctcgc
ctgatcagctattctgtgatcgagaaggaacagaaaataaaagaaggtctctacatgatg
ggcctgaaagagggtattttccatctttcgtggttgattgcatatgctttgcagtttgcg
atttcatctgggatcattacagcctgcaccatgacaagccttttcaagtatagtgataag
tcagtggtgtttatgtacttcttttcgtttggactaagtgcaatcatgctgtcatttttg
atctctacattcttcacacgagccaaaacagctgtggctgttggaaccctatcttttcta
ggtgcctatttcccttattacactgtcaacgaccaggctgtccctatgatattaaaggtc
cttgcttctttgctttctcctacagcctttgctctagggtcaattaactttgctgactat
gagcgtgctcaagttggacttcgttggagcaacatatggagggcatcatctggagtgaat
tttgtggtctgtctcctgatgatgttgcttgatgcactgctgtactgtgtgattggtctt
tacctggataaggtccttcccagagagaatggaatacgttatccatggaacttcatattc
cataggtgcttctggaaaaagaaaagtattgttgaacatcatgcttccagtttaaaagtt
acagttaatgataagatttcgaagaaaaaggcaagtttttctgggaaagatacttttgaa
cctgccgtggaagcgataagcttggacatgaagcaacaagagcttgatggcagatgcatc
caaattaggaatttgcataaggtgtatgctacaaagaaggggaaatgttgtgctgttaac
aaattgaagttgaccttgtatgaaaatcagattcttgctcttctagggcacaatggagct
ggtaaaagtacaaccatttcaatgcttgttggccttcttcctcctacttcaggggatgct
acggtttttggaaagaatatcataacagacatggacgagatacggaagggattaggtgtg
tgccctcaaaatgatattctttttccagaattgaccgtgagagagcatttggaaattttt
gccgcattgaagggtgtgaaggaagaaattttggagagagttgttacagatatgattgat
gaagtgggtttggctgataaaaccaacacaactgttgaggctctttctggtggcatgaag
aggaaattgtctcttggaattgcactaataggagatagcaaggtaattattctagatgaa
cctactagtggaatggatccatactcaatgcgcttgacatggcagttaataaaaaaaaag
aaaaagggcaggataatattactgacaacacactcgatggatgaagctgatgaactagga
gatcgaatagctattatggctaatggttcattgagatgctgtggaagttcccttttcttg
aagcatcagtatggggttggttatacactaacactagtgaagtctgcacctactgcctcg
gtagcttctgatattgtataccgtcatattccatcggcaacatgtgtgagtgaggttgga
accgagatttccttcaagcttcctttagcatcttcatcatcttttgaaagtatgtttagg
gaaattgaaagttgcatgggaagatcagttggtaactctgaaacaagtgggtgtgaggac
aaagactatcttggcatcgaaagttatggtatatctgtaacaactctggaggaggtattc
ctgagagttgcaggatgtgactatgatgaagtggaatgcattgagcgtaatgaaggcttt
cttttacctgatgctgtgatttctcttgcttctcatgatcatgctcccaaaaaaattttg
tattccaaagttcttggaaattacaaatgcattcttggggtcatatcaaccaaagtgggg
agagcttgtggtttaatttttgctacagttttgagtttcataaacttcttaagtatgcag
tgctgttgctgttgtttcatttcaaggtcaacattctggcaacattctagagcattattc
ataaaaaggatgacatctgctcggagagaccgtaaaacaattgttttccagcttttaatt
cctgctgtctttttgctttttggacttctttttctcaagctcaagccacatcctgatcag
cggtctctgacctttacaacttcaaaatttaatccactattaagcggtggtggtggtggt
ggtccaattccttttgataagtcctggcctattgcaaaggagattgcacagtatgttgaa
ggggggttgattcaaagctttaaaccgagttcatataaattcccagattcaaaaaaggca
ttagctgatgcaatcgaggtggcagggccaactttgggtccagttttactttctatgagt
gaatttttgatgtccagctttaatgaatcctaccagtcaaggtatggggcgattgtgatg
gatgaccagaatgaagatggaagtttagggtacactgtactacacaacagctcttgtcag
catgctgctccaacttttatcaatttaatgaatgctgcgattcttaggcttgctactcat
aacaaaaatatgacaattcaaacacgtaatcatcctctgccaatgacggaaagccagcgc
ttgcaacgccatgatcttgatgcattttctgcagcagttattgttagcattgccttctct
ttcattcctgcctcatttgcggttcccattgtaaaggaacgtgaagtaaaagctaagcac
caacaactaataagtggggtttctgtactttcgtattggtcgtctacatatatatgggac
ttcgtcagcttcttatttccttcatcttttgcaataattcttttttacatctttggtctg
gatcagtttattggaaggggttgtgtcttgccaacggtccttatgctcttgggatatgga
ttatcaactgcgtcattaacatattgccttacatttttcttttctgaccacaccatggca
cagaatgtggttctcttggttcactttttcactggactcattcttatggttatctcattc
attatggggcttatacagacaacagcaagtgcaaatacttttcttaagaatttcttcaga
ttatctccagggttttgctttgctgacgggcttgcttcgttggctcttctacggcaaggg
atgaaagataaatcaagtgatggggtttttgattggaatgttactggcgcctcaatttgt
tatcttggtcttgagagcattatttacttcctcttgacacttgggcttgaactctggcct
tctcacaaattgaatcctgtcagaatcaagcagtggtggagtatgaaaggtctccagcca
ggcccttctagttatttagaacctctcttgaaaccttcctcaaaaactgttgctcttgat
cttgatgaagacatagatgtgaaaatagaaagacacagggtactttcaggttcaattcat
aatgccatcatctatttgcgtaatcttcagaaggtgtatcctggaggtatgcatcacggc
tcaaaagttgcagtacagtcattgactttctcagttcaagcaggagaatgttttggattt
ttaggaacaaatggtgctgggaaaaccacaacactttcaatgctgtctggagaagaatcg
ccaactggtggaactgcttatatttttggcaaagacatatgctccaatcccaaggccgct
cgtcagcatatcggatattgcccacaattcgatgctctattagaatttctaactgtccga
gagcatcttgagctttatgcaagaataaaaggagttccagaatacaggatagatgatgtt
gtaatggaaaagttagaggagtttgatttgttgaagcatgcggacaagccttcattttcc
ctcagtggtggaaacaagcgcaaattatctgttgcaattgcaatggttggagatcctcca
atagtcattctagacgagccatccacaggtatggatcctcttgccaaacgattcatgtgg
gaagtgatatctcggttatctaccagacaaggaaaaacagcagtgattctaacaacgcac
agcatgaatgaagctcaagctctgtgcactaggattgggataatggttggaggccgacta
agatgcattgggagtcctcagcatctgaaaacacgatttggaaatcaccttgagctagag
gttaaacctactgaagtcagtactttggacttggcaaacctttgccaaattattcaagaa
aggctttttgacattccttctcacccaagaagtttacttgatgaccttgaagtttgcatt
gggggtattgattcggtagcatcagagaatgcatctgcggcagagattagcttgtcgaag
gaaatgataattgcaattggacactatcttggcaatgaagaaagaacaaaggcacttgta
ttgtctacaccggtttccgatgggatttttggtgaacagctatctgagcagttggttcgg
catggtggcataccattaccaatattttccgagtggtggttagccaaagaaaagttctct
gtgattgattcatttatcctctcttcatttcctggagtcacattccaaggatgcaatggg
ttgagtgctaaatatcagttgccatatagagaaggcctctcacttgcagatgtttttgga
cacctggaacgaaatagaattcagctgggcatttcagagtacagcatcagtcagtctact
ctggagaccatatttaatcattttgctgcaaactcatga
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integrated database retrieval system
