KEGG   Alnus glutinosa (common alder): 133874187
Entry
133874187         CDS       T10577                                 
Name
(RefSeq) DNA repair protein RAD5B
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
aglu  Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:aglu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aglu03400]
    133874187
DNA repair and recombination proteins [BR:aglu03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    133874187
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4 zf-C3HC4_3 zf-C3HC4_4 zf-RING_UBOX zf-RING_2 zf-C3HC4_2 ResIII DEAD Prok-RING_4 RING_XB3-XBAT31 zf-RING_5 zf-RING_4 zf-ANAPC11
Other DBs
NCBI-GeneID: 133874187
NCBI-ProteinID: XP_062168027
LinkDB
Position
1:14832266..14839610
AA seq 1324 aa
MEVKPMNEIDDIIRNPGFLPPPVTVKRTVTSTGARITTQIKADDSEDSEEAKPLIGCEPE
SGVNALVSENVRSDCQNGSVKEEVNVKMSLGESLKEMNTNVMSEEECLRTQINEEQPKEP
EVVRVKEEPDGRSDCPDGLVKEEVKASTRMSFDEFLKVTKTKVMSEEECLRTQINEEQPK
KPEVVRVKEEPDGHSDCPDGLVKDEVKASTRMSFDEFLKVTNTKVMSEEECLRTQIKEEQ
PREVLRVKQEPNGVEDKRLVRENVRTDCPDGWVKYEVNASKRMSFDEFLKATDTKAISGE
ELLTTPVNVERPKEPEAIKVKEEPDVGFEGNRPSVPEKLVSGMSSQEGLLLARYTKSDGE
SAISHEKKLEPKDSEKAESPNGSRPNVRVKEEPALGAEKKVCVKEQSVGSNFSSVKKEIN
EDRRISSGLVQDGDFPEEPDWFLVGRTIVTALSTTKGRKLADNEIVDFTFPSPHWRHNAQ
WIVRFSTKRFGEIGRLPMEWAKCVIPLVNGSKVKILGRCVAAPSNLSMMQEILLYVSFYI
HRSIFTECDKSSWRLDASYSIDSTLYPLLTLFELLKINPYQKAEFTPEDLHSRKRVLNLE
GDSEEAASTLPILKRRKGCQQYTEQTNDEQAVTESSLNKLVGAVEVYNLEEMEPPYTLMC
ELRPYQKQALYWMSELEKGIDVEKAAKTLHPCWAAYRICDRRASSIYVNNFSGEATTKFP
TATQMARGGILADAMGLGKTVMTIGLILARPGRGCPANGTKVADTTEITKKTKKDCHMNT
SLKGNGGTLIVCPMALLGQWKDELETHSKPETLSIFVHYGGGRTNDPKVMAEYDVVLTTY
GVLSAAYKNDAENSVFHRVSWYRVVLDEAHTIKSWKTQGAQAAFTLSSHCRWCLTGTPLQ
NNLEDLYSLICFLHVEPWCNWAWWNKLIQRPYENGDLRGLRLVKAILRPLMLRRTKETKD
KEGRPILVLPPTDIQIIECEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNFASILELL
LRLRQCCNHPYLVMSRAGSQKYADLNKLARRFLEINPDSSTTKQIGPTHAYIEEVVDGIR
KGENTECPICMEYADDPVLTPCAHRMCRECLLSSWRTPTTGLCPICRQLLKKTDLITCPT
ENQFWVDVDTNWKESSKVSKLFDCLERIRRSGSGEKSIVFSQWTSFFDLLEIPLKRRGIG
FLRFDGKLAQKQRECVLKEFSETKEKMVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVE
EQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQHMISGALTDQEVRTARIEELK
MLFR
NT seq 3975 nt   +upstreamnt  +downstreamnt
atggaggttaagcccatgaatgaaatcgacgatatcattcggaatccgggcttcctgccc
ccgcccgtaaccgtgaagcgcacagttaccagcaccggcgctcggattacgacccagatc
aaggcagacgactccgaggactctgaggaagcgaaaccgcttattgggtgcgagcccgag
agcggagtgaatgctcttgtgagtgaaaatgtgcgctcagattgtcaaaacggctcagtg
aaagaagaggtcaatgttaagatgtcgcttggcgaatctcttaaggagatgaatacgaat
gtgatgtctgaggaggagtgtctgcgaacccagattaacgaagagcagcctaaggaacca
gaagtggtcagagtcaaggaggagcctgacgggcgctcggattgtccagacggcttggta
aaagaagaggttaaggcctcgacgagaatgtcgtttgacgagtttcttaaggtgacgaaa
acgaaggtgatgtctgaggaggagtgtctgagaacacaaattaacgaagagcagcctaag
aaaccagaagtggtgagagtcaaggaggagcctgatgggcactcagattgtccagacggc
ttggtaaaagacgaggttaaggcctcgacgagaatgtcgtttgatgagtttcttaaggtg
acgaatacgaaggtgatgtctgaggaggagtgtctgagaacccagattaaagaagagcag
cctagggaggtgctcagagtcaagcaggagcctaatggggttgaggacaagcgtctcgtg
agggaaaatgtgcgcacagattgtccagacggctgggtaaaatacgaggttaatgcctcg
aagagaatgtcgtttgacgagtttcttaaggcaacagatacaaaggcgatatccggggag
gagttgctgacaaccccggtcaacgtagagcggcctaaggaaccagaagcaattaaagtc
aaggaagaacctgatgtgggttttgagggtaatcggccatcggtacccgaaaagttggtc
agcggcatgtcctctcaagaggggcttttgttagcgcgttacactaagtctgatggtgaa
tctgccatttcacacgagaaaaagttggagcctaaagattcagagaaagccgagtcgcct
aatgggtctaggcctaatgttagagtgaaagaggaacctgctttgggggctgagaagaag
gtatgtgtgaaagaacagtcggttggttctaacttttcttccgtgaagaaagaaataaac
gaagatcgaaggattagttcaggcttggtccaggatggggattttccggaggagccagat
tggtttctggtgggaaggacgattgtcactgcactttcgaccacaaaaggaaggaaattg
gctgacaatgagattgttgatttcacatttccctccccacattggagacataatgctcag
tggattgttcgcttttctaccaaacggttcggagagattggtcggcttccaatggagtgg
gcaaaatgtgttattccgcttgtaaatggttctaaggttaaaattcttggacgatgtgta
gctgcaccatcaaacctttccatgatgcaagaaatcctgttgtatgtaagcttttatatt
catcgttcaatattcacggagtgtgacaagtcttcgtggaggctagacgcttcctatagc
attgattctacactttatcctcttctcactctgttcgaattgctgaaaattaatccatat
cagaaggctgagtttacccctgaggaccttcattctcggaaacgtgtgctaaatctagaa
ggtgattcagaagaagctgcatcgaccttgcctattctgaagcgaagaaagggttgtcaa
cagtatacagaacaaaccaatgatgaacaagctgtcacggagtcatctctgaataaactt
gtgggggcagtagaagtgtataacttggaggagatggaacccccatatacactcatgtgt
gagcttaggccgtaccagaaacaagcactatactggatgtcagaattagaaaagggaatt
gatgttgagaaagcagcaaaaactcttcatccatgctgggcagcatatcgtatatgcgat
cggcgggcttcctctatttatgtcaacaatttctcaggggaagcaactactaaatttcca
actgcaacacagatggcaagaggaggaatattagcagatgcaatggggcttggaaagact
gtaatgacaatcggtctaatacttgcaagaccaggaagaggatgccctgctaatggcact
aaagttgcagatactactgaaattacgaagaagacaaagaaagattgtcatatgaacacc
tcattgaaaggaaatggtggcactcttattgtttgtcccatggcattgttagggcaatgg
aaggatgagcttgaaacccactcgaagccagaaactttatcaatttttgttcactatggt
gggggcagaacaaatgacccaaaggtcatggcagaatacgacgtggtcttgacaacatat
ggagtactatctgccgcttataaaaatgatgcagagaacagcgtcttccacagggtcagt
tggtatagggtggttctagatgaagctcataccataaaatcttggaagactcaaggtgct
caggctgcctttacattgtcgtcacactgcaggtggtgtctaacgggaacccctcttcag
aataatttggaagacctctacagccttatatgcttcttacatgttgaaccatggtgcaat
tgggcttggtggaacaaattgattcaaaggccttatgagaatggtgatctaagagggctg
agactggtcaaagctatattgaggccattgatgctgagaaggacaaaggaaacaaaggat
aaagaaggaaggccaattctcgttctacctccaactgacattcaaatcattgagtgtgaa
cagtcagaagccgaacatgacttttatgatgcgctttttaagagatctaaagtccaattt
gaccagtttgttgcacaaggcaaggttcttcacaactttgcatcaatccttgagctactg
cttcgattgaggcaatgctgcaaccacccgtatcttgttatgagtcgtgctggttcccaa
aagtatgcagacctgaacaagcttgcaagaaggttcctcgaaatcaatcctgattcttcc
actacaaagcagattggcccaacccatgcatacattgaagaggttgttgacggtatccgg
aagggcgaaaacacagagtgccccatatgcatggagtatgctgacgaccctgttctcact
ccatgcgcgcataggatgtgtagagagtgtctcctctcaagctggcggaccccaacaact
gggctatgcccaatttgccggcaattactcaaaaagaccgacctcataacatgcccaaca
gaaaaccagttctgggttgatgttgacacgaactggaaggagtcttcgaaggtttcaaaa
ctctttgactgcttggaacgtattcgccggtcaggttctggtgaaaagagcattgttttc
agccagtggacttcgttttttgatctccttgagatccccttgaagaggagaggtatcggc
ttcttaaggtttgatggaaagcttgcgcagaagcagagggagtgtgtcctgaaggagttt
agcgagaccaaggagaaaatggtattgctgatgtctttgaaagctggtggtgttggcttg
aatctaactgcagcctctaatgtcttcttaatggatccatggtggaatcctgccgttgaa
gagcaagcaatcatgcgaattcatcgtattgggcaaaagcgaacggtgcgtgtcagaaga
ttcattgttaaggacacggtggaggaaagaatgcaacaagtccaggcacgtaagcagcac
atgatttctggggccctcaccgatcaggaggttcggacggctaggattgaggagctcaaa
atgcttttccgatga

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