Alnus glutinosa (common alder): 133874232
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Entry
133874232 CDS
T10577
Name
(RefSeq) replication factor C subunit 3 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03030
DNA replication
aglu03410
Base excision repair
aglu03420
Nucleotide excision repair
aglu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133874232
03410 Base excision repair
133874232
03420 Nucleotide excision repair
133874232
03430 Mismatch repair
133874232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aglu03032
]
133874232
03036 Chromosome and associated proteins [BR:
aglu03036
]
133874232
03400 DNA repair and recombination proteins [BR:
aglu03400
]
133874232
DNA replication proteins [BR:
aglu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
133874232
DNA Replication Termination Factors
ELG1-RFC complex
133874232
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
133874232
DNA repair and recombination proteins [BR:
aglu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
133874232
Check point factors
HRAD17(Rad24)-RFC complex
133874232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA
Rad17
Sigma54_activ_2
RuvB_N
Mg_chelatase
AAA_22
AAA_5
AAA_11
DUF815
nSTAND3
ABC_tran
AAA_23
AAA_24
AAA_29
FtsK_SpoIIIE
Spore_III_AA
NPHP3_N
AAA_2
AAA_16
TsaE
SprT-like
AAA_30
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
133874232
NCBI-ProteinID:
XP_062168085
LinkDB
All DBs
Position
7:18051558..18074723
Genome browser
AA seq
359 aa
AA seq
DB search
MLWVDKYRPKSLDQVLVHQDIAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALIRQMFG
PSAEKVKVENKTWKVDAGSRTLDIELTTLSSTNHVELSPSDAGFQDRYVVQEIIKEIAKN
RPIDTKGKRGFKVLVLNEVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSKVTEAIRSR
CLNVRINAPTEEEIVEVLEFIGNKEGLQLPSGFAARIAEKSNRSLRRAILAFETCRVQQY
PFTSKQVIPPMDWEEYIAEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE
LLKKLDAELKHEVCHWAAYYEHRMCLGQKAIFHIEDDARVLLVAGACKEVVCRGHFDDA
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggtagacaagtacagacccaaaagcttagaccaggtcctggtccaccaagac
atcgcccaaaacctcaagaaactggtcacggagcaggactgcccgcatctgctcttctat
ggtcctccgggctccggaaagaaaaccctaatcatggccctcattcgtcagatgttcggc
cctagcgctgagaaggtgaaggtggagaataagacatggaaagtcgatgctggaagtaga
actcttgatatagagcttaccacattgtcaagcaccaaccatgtggaactgagtcccagt
gatgcagggtttcaggacagatatgttgttcaagaaataattaaagaaatagctaaaaat
agacctattgacacaaaaggaaaaagaggatttaaagtattagtgctcaatgaggtagac
aaactttcaagagaagcccagcattctctccgaagaactatggagaaatatagtgcttat
tgtaggctgatactatgctgcaacagttcttcaaaggttactgaagcaatccggtcccgc
tgcttgaatgtgcgaataaatgcaccaacagaagaagagattgttgaggtattggaattc
attggaaacaaagaaggactgcaacttccatctggatttgctgctcgtatagcagaaaag
tcaaatcggagtttaaggagagccatactggcatttgagacttgccgtgtccaacagtat
ccttttacaagcaaacaagtaatacccccaatggattgggaggagtatattgctgaaata
gcatctgacataatgaaggagcagagtcctaaaaggctgtttcaggttcgagggaagttg
tatgagctacttgttaattgtattccaccagagattatcttgaagaggctgctttatgaa
ttattaaagaaattggacgcagaactaaaacatgaggtttgccattgggctgcatattat
gagcataggatgtgtcttggacagaaagccatatttcacattgaagatgatgcaagggtt
ctactagtagcaggtgcatgcaaggaggtggtatgtaggggccattttgacgatgcctaa
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integrated database retrieval system
